Difference between revisions of "TSS:Hg 104267.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-14801 |entrez_id=219681 |gc_percent=0.442786 |gene_alias=CT81|KU-CT-1 |gene_description=armadillo repeat containing 3 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KU-CT-1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=-14801 | |distance_to_tss=-14801 | ||
| + | |end=22913232 | ||
|entrez_id=219681 | |entrez_id=219681 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_173081 | |nearest_refseq=NM_173081 | ||
|nearest_unigene=Hs.659807 | |nearest_unigene=Hs.659807 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=22913213 | ||
| + | |strand=+ | ||
|tata_box="51(TCCTCTTAAGGG,-,0.00),52(CCTCTTAAGGGC,+,0.00)" | |tata_box="51(TCCTCTTAAGGG,-,0.00),52(CCTCTTAAGGGC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104267.1 | |tss_id=hg_104267.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:45, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -14801 |
|---|---|
| Nearest PromoterID: | NM_001282746 |
| Entrez ID: | 219681 |
| Nearest Unigene: | Hs.659807 |
| Nearest Refseq: | NM_173081 |
| Nearest Ensembl: | ENSG00000165309 |
| Gene Name: | ARMC3 |
| Gene Alias: | CT81 |
| Gene Description: | armadillo repeat containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "51(TCCTCTTAAGGG,-,0.00),52(CCTCTTAAGGGC,+,0.00)" |
