Difference between revisions of "TSS:Hg 104362.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=52 |entrez_id=79896 |gc_percent=0.691542 |gene_alias=TSH1 |gene_description=threonine synthase like 1 |gene_name=THNSL1 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000524413.5:0 ENST00000376356.4:0 uc001isi.6:0 uc057shy.1:0 AK125249:0 BC035132:0 BX647989:0 NM_024838:-17 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
| + | |end=25016666 | ||
|entrez_id=79896 | |entrez_id=79896 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=TSH1 | |gene_alias=TSH1 | ||
|gene_description=threonine synthase like 1 | |gene_description=threonine synthase like 1 | ||
| − | |gene_name=THNSL1 | + | |gene_id=79896 |
| + | |gene_name=threonine synthase like 1 | ||
| + | |gene_source=HGNC:26160 | ||
| + | |gene_symbol=THNSL1 | ||
| + | |gene_synonyms=FLJ22002 TSH1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26160 | ||
|nearest_ensembl=ENSG00000185875 | |nearest_ensembl=ENSG00000185875 | ||
|nearest_promoter_id=NM_024838 | |nearest_promoter_id=NM_024838 | ||
|nearest_refseq=NM_024838 | |nearest_refseq=NM_024838 | ||
|nearest_unigene=Hs.645274 | |nearest_unigene=Hs.645274 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=25016595 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000524413.5 ENST00000376356.4 uc001isi.6 uc057shy.1 AK125249 BC035132 BX647989 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104362.1 | |tss_id=hg_104362.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8IYQ7 | ||
}} | }} | ||
Revision as of 20:49, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000524413.5 ENST00000376356.4 uc001isi.6 uc057shy.1 AK125249 BC035132 BX647989 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000524413.5:0 ENST00000376356.4:0 uc001isi.6:0 uc057shy.1:0 AK125249:0 BC035132:0 BX647989:0 NM_024838:-17 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_024838 |
| Entrez ID: | 79896 |
| Nearest Unigene: | Hs.645274 |
| Nearest Refseq: | NM_024838 |
| Nearest Ensembl: | ENSG00000185875 |
| Gene Name: | threonine synthase like 1 |
| Gene Alias: | TSH1 |
| Gene Description: | threonine synthase like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
