Difference between revisions of "TSS:Hg 104365.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=-559 |entrez_id=57512 |gc_percent=0.606965 |gene_alias=- |gene_description=G protein-coupled receptor 158 |gene_name=GPR158 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000376351.3:256 uc001isj.4:256 AK095120:256 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=256 | ||
|distance_to_tss=-559 | |distance_to_tss=-559 | ||
| + | |end=25174806 | ||
|entrez_id=57512 | |entrez_id=57512 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=G protein-coupled receptor 158 | |gene_description=G protein-coupled receptor 158 | ||
| − | |gene_name=GPR158 | + | |gene_id=57512 |
| + | |gene_name=G protein-coupled receptor 158 | ||
| + | |gene_source=HGNC:23689 | ||
| + | |gene_symbol=GPR158 | ||
| + | |gene_synonyms=KIAA1136 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23689 | ||
|nearest_ensembl=ENSG00000151025 | |nearest_ensembl=ENSG00000151025 | ||
|nearest_promoter_id=NM_020752 | |nearest_promoter_id=NM_020752 | ||
|nearest_refseq=NM_020752 | |nearest_refseq=NM_020752 | ||
|nearest_unigene=Hs.499108 | |nearest_unigene=Hs.499108 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=25174797 | ||
| + | |strand=+ | ||
|tata_box="-69(GCCTCTTTAAAC,-,0.00),56(ACGTCTTAAAGG,-,0.00)" | |tata_box="-69(GCCTCTTTAAAC,-,0.00),56(ACGTCTTAAAGG,-,0.00)" | ||
| + | |transcript_name=ENST00000376351.3 uc001isj.4 AK095120 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104365.1 | |tss_id=hg_104365.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T848 | ||
}} | }} | ||
Revision as of 20:49, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376351.3 uc001isj.4 AK095120 |
|---|---|
| Distance: | 256 |
| Num_trans: | 3 |
| All_trans: | ENST00000376351.3:256 uc001isj.4:256 AK095120:256 |
TATA-Box annotation
| Distance to TSS: | -559 |
|---|---|
| Nearest PromoterID: | NM_020752 |
| Entrez ID: | 57512 |
| Nearest Unigene: | Hs.499108 |
| Nearest Refseq: | NM_020752 |
| Nearest Ensembl: | ENSG00000151025 |
| Gene Name: | G protein-coupled receptor 158 |
| Gene Alias: | - |
| Gene Description: | G protein-coupled receptor 158 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-69(GCCTCTTTAAAC,-,0.00),56(ACGTCTTAAAGG,-,0.00)" |
