Difference between revisions of "TSS:Hg 104388.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=418 |entrez_id=53904 |gc_percent=0.691542 |gene_alias=DFNB30 |gene_description=myosin IIIA |gene_name=MYO3A |gene_type=protein-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC045538:-211 ENST00000376302.5:-213 uc001ism.3:-213 BC036079:-213 ENST00000265944.9:-220 uc001isn.3:-220 AF229172:-220 AY101367:-220 AK310494:-258 NM_017433:-414 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=-211 | ||
|distance_to_tss=418 | |distance_to_tss=418 | ||
| + | |end=25934496 | ||
|entrez_id=53904 | |entrez_id=53904 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=DFNB30 | |gene_alias=DFNB30 | ||
|gene_description=myosin IIIA | |gene_description=myosin IIIA | ||
| − | |gene_name=MYO3A | + | |gene_id=53904 |
| + | |gene_name=myosin IIIA | ||
| + | |gene_source=HGNC:7601 | ||
| + | |gene_symbol=MYO3A | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7601 | ||
|nearest_ensembl=ENSG00000095777 | |nearest_ensembl=ENSG00000095777 | ||
|nearest_promoter_id=NM_017433 | |nearest_promoter_id=NM_017433 | ||
|nearest_refseq=NM_017433 | |nearest_refseq=NM_017433 | ||
|nearest_unigene=Hs.662630 | |nearest_unigene=Hs.662630 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=25934486 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC045538 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104388.1 | |tss_id=hg_104388.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q86VY5 | ||
}} | }} | ||
Revision as of 20:50, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC045538 |
|---|---|
| Distance: | -211 |
| Num_trans: | 10 |
| All_trans: | BC045538:-211 ENST00000376302.5:-213 uc001ism.3:-213 BC036079:-213 ENST00000265944.9:-220 uc001isn.3:-220 AF229172:-220 AY101367:-220 AK310494:-258 NM_017433:-414 |
TATA-Box annotation
| Distance to TSS: | 418 |
|---|---|
| Nearest PromoterID: | NM_017433 |
| Entrez ID: | 53904 |
| Nearest Unigene: | Hs.662630 |
| Nearest Refseq: | NM_017433 |
| Nearest Ensembl: | ENSG00000095777 |
| Gene Name: | myosin IIIA |
| Gene Alias: | DFNB30 |
| Gene Description: | myosin IIIA |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
