Difference between revisions of "Template:PeakPage"
From referenceTSS
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{{Loading|loadingimage=sprites.gif}}<br><br> | {{Loading|loadingimage=sprites.gif}}<br><br> | ||
+ | <html> | ||
+ | <style> | ||
+ | table { | ||
+ | border-collapse:collapse; | ||
+ | width: 400px; | ||
+ | } | ||
+ | tr{ | ||
+ | border-bottom-style: dotted; | ||
+ | border-bottom-width: thin; | ||
+ | } | ||
+ | </style> | ||
+ | </html> | ||
+ | <table border="0" > | ||
+ | <tr><th scope="row" align="left">PeakID:</th><td>[[peak_id::{{{peak_id}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Start:</th><td>[[start::{{{start}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">End:</th><td>[[end::{{{end}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Peak Score:</th><td>[[peak_score::{{{peak_score}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Distance to TSS:</th><td>[[distance_to_tss::{{{distance_to_tss}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Nearest PromoterID:</th><td>[[nearest_promoter_id::{{{nearest_promoter_id}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Entrez ID:</th><td>[[entrez_id::{{{entrez_id}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Nearest Unigene:</th><td>[[nearest_unigene::{{{nearest_unigene}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Nearest Refseq:</th><td>[[nearest_refseq::{{{nearest_refseq}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Nearest Ensembl:</th><td>[[nearest_ensembl::{{{nearest_ensembl}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene Name:</th><td>[[gene_name::{{{gene_name}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene Alias:</th><td>[[gene_alias::{{{gene_alias}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene Description:</th><td>[[gene_description::{{{gene_description}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene Type:</th><td>[[gene_type::{{{gene_type}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">CpG%:</th><td>[[cpg_percent::{{{cpg_percent}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">GC%:</th><td>[[gc_percent::{{{gc_percent}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):</th><td>[[tata_box::{{{tata_box}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Transcript_name:</th><td>[[transcript_name::{{{transcript_name}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Distance:</th><td>[[distance::{{{distance}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Num_trans:</th><td>[[num_trans::{{{num_trans}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">All_trans:</th><td>[[all_trans::{{{all_trans}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">GeneID:</th><td>[[gene_id::{{{gene_id}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">HGNC/MGI_ID:</th><td>[[hgnc_mgi_id::{{{hgnc_mgi_id}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">UniProt_ID:</th><td>[[uniprot_id::{{{uniprot_id}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene_name:</th><td>[[gene_name::{{{gene_name}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene_symbol:</th><td>[[gene_symbol::{{{gene_symbol}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene_synonyms:</th><td>[[gene_synonyms::{{{gene_synonyms}}}]]</td></tr> | ||
+ | <tr><th scope="row" align="left">Gene_source:</th><td>[[gene_source::{{{gene_source}}}]]</td></tr> | ||
+ | </table> | ||
+ | <!-- | ||
{{Fontsize|3|Basic information about the peak}}<br><br> | {{Fontsize|3|Basic information about the peak}}<br><br> | ||
{{Fontsize|3|TATA-Box annotation}}<br><br> | {{Fontsize|3|TATA-Box annotation}}<br><br> | ||
Line 5: | Line 50: | ||
{{Fontsize|3|Gene and protein annotation}}<br><br> | {{Fontsize|3|Gene and protein annotation}}<br><br> | ||
{{Fontsize|3|TSS classification}}<br><br> | {{Fontsize|3|TSS classification}}<br><br> | ||
+ | --> |
Revision as of 16:48, 26 December 2017
PeakID: | {{{peak_id}}} |
---|---|
Chr: | {{{chr}}} |
Start: | {{{start}}} |
End: | {{{end}}} |
Strand: | {{{strand}}} |
Peak Score: | {{{peak_score}}} |
Distance to TSS: | {{{distance_to_tss}}} |
Nearest PromoterID: | {{{nearest_promoter_id}}} |
Entrez ID: | {{{entrez_id}}} |
Nearest Unigene: | {{{nearest_unigene}}} |
Nearest Refseq: | {{{nearest_refseq}}} |
Nearest Ensembl: | {{{nearest_ensembl}}} |
Gene Name: | {{{gene_name}}} |
Gene Alias: | {{{gene_alias}}} |
Gene Description: | {{{gene_description}}} |
Gene Type: | {{{gene_type}}} |
CpG%: | {{{cpg_percent}}} |
GC%: | {{{gc_percent}}} |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): | {{{tata_box}}} |
Transcript_name: | {{{transcript_name}}} |
Distance: | {{{distance}}} |
Num_trans: | {{{num_trans}}} |
All_trans: | {{{all_trans}}} |
GeneID: | {{{gene_id}}} |
HGNC/MGI_ID: | {{{hgnc_mgi_id}}} |
UniProt_ID: | {{{uniprot_id}}} |
Gene_name: | {{{gene_name}}} |
Gene_symbol: | {{{gene_symbol}}} |
Gene_synonyms: | {{{gene_synonyms}}} |
Gene_source: | {{{gene_source}}} |