Difference between revisions of "TSS:Hg 104545.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=164 |entrez_id=1326 |gc_percent=0.761194 |gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |gene_description=mitogen-activa...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |COT= | ||
| + | |EST= | ||
| + | |ESTF= | ||
| + | |MEKK8= | ||
| + | |TPL2= | ||
| + | |Tpl-2= | ||
| + | |all_trans=ENST00000415139.5:-36 uc057snl.1:-36 ENST00000375322.2:51 uc057snm.1:51 AK290320:-52 AK313295:-53 D14497:71 ENST00000542547.5:-156 NM_001244134:-156 NM_005204:-156 uc009xlf.2:-156 ENST00000263056.5:-240 uc001ivi.3:-240 ENST00000413724.5:472 uc057snn.1:472 | ||
| + | |c-COT= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-36 | ||
|distance_to_tss=164 | |distance_to_tss=164 | ||
| + | |end=30434193 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT | |gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT | ||
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
| − | |gene_name=MAP3K8 | + | |gene_id=1326 |
| + | |gene_name=mitogen-activated protein kinase kinase kinase 8 | ||
| + | |gene_source=HGNC:6860 | ||
| + | |gene_symbol=MAP3K8 | ||
| + | |gene_synonyms=EST MEKK8 Tpl-2 c-COT | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6860 | ||
|nearest_ensembl=ENSG00000107968 | |nearest_ensembl=ENSG00000107968 | ||
|nearest_promoter_id=NM_005204 | |nearest_promoter_id=NM_005204 | ||
|nearest_refseq=NM_005204 | |nearest_refseq=NM_005204 | ||
|nearest_unigene=Hs.432453 | |nearest_unigene=Hs.432453 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=30434176 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000415139.5 uc057snl.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104545.1 | |tss_id=hg_104545.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T857 | ||
}} | }} | ||
Revision as of 20:57, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000415139.5 uc057snl.1 |
|---|---|
| Distance: | -36 |
| Num_trans: | 15 |
| All_trans: | ENST00000415139.5:-36 uc057snl.1:-36 ENST00000375322.2:51 uc057snm.1:51 AK290320:-52 AK313295:-53 D14497:71 ENST00000542547.5:-156 NM_001244134:-156 NM_005204:-156 uc009xlf.2:-156 ENST00000263056.5:-240 uc001ivi.3:-240 ENST00000413724.5:472 uc057snn.1:472 |
TATA-Box annotation
| Distance to TSS: | 164 |
|---|---|
| Nearest PromoterID: | NM_005204 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Alias: | AURA2 |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
