Difference between revisions of "TSS:Hg 104602.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=17 |entrez_id=6935 |gc_percent=0.711443 |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |gene_description=zi...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |BZP= | ||
| + | |DELTAEF1= | ||
| + | |FECD6= | ||
| + | |NIL2A= | ||
| + | |PPCD3= | ||
| + | |TCF8= | ||
| + | |ZFHEP= | ||
| + | |ZFHX1A= | ||
| + | |all_trans=ENST00000560196.5:0 ENST00000542879.5:0 uc057soi.1:0 uc057soj.1:0 AK309331:0 AK294775:0 ENST00000561304.5:11 uc057sok.1:11 AK311372:11 ENST00000488625.6:-279 uc057soh.1:-279 BX647794:-279 ENST00000320985.14:299 uc001ivs.5:299 ENST00000361642.9:346 NM_001174093:346 NM_001174096:346 NM_001174095:346 NM_030751:346 uc001ivu.5:346 ENST00000559858.5:386 ENST00000560721.6:386 uc057sol.1:386 uc001ivv.5:386 AK307510:386 AK091478:386 AK299541:386 ENST00000558440.5:387 uc057som.1:387 AK310924:387 AK311137:387 AK314683:387 U12170:387 ENST00000424869.5:390 ENST00000437844.6:390 uc057son.1:390 uc057soo.1:390 AK308822:390 BC009572:390 AL831979:390 BC065705:392 BC112392:393 BC107781:394 ENST00000542815.7:396 uc010qeh.3:396 AK300830:396 D15050:406 AB384934:408 KJ904571:408 U19969:425 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
| + | |end=31318826 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | ||
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
| − | |gene_name=ZEB1 | + | |gene_id=6935 |
| + | |gene_name=zinc finger E-box binding homeobox 1 | ||
| + | |gene_source=HGNC:11642 | ||
| + | |gene_symbol=ZEB1 | ||
| + | |gene_synonyms=AREB6 BZP FECD6 NIL-2-A ZEB Zfhep Zfhx1a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
|nearest_promoter_id=NM_001323645 | |nearest_promoter_id=NM_001323645 | ||
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| + | |num_trans=50 | ||
| + | |species=human | ||
| + | |start=31318773 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000560196.5 ENST00000542879.5 uc057soi.1 uc057soj.1 AK309331 AK294775 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104602.1 | |tss_id=hg_104602.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DGU2 | ||
}} | }} | ||
Revision as of 20:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000560196.5 ENST00000542879.5 uc057soi.1 uc057soj.1 AK309331 AK294775 |
|---|---|
| Distance: | 0 |
| Num_trans: | 50 |
| All_trans: | ENST00000560196.5:0 ENST00000542879.5:0 uc057soi.1:0 uc057soj.1:0 AK309331:0 AK294775:0 ENST00000561304.5:11 uc057sok.1:11 AK311372:11 ENST00000488625.6:-279 uc057soh.1:-279 BX647794:-279 ENST00000320985.14:299 uc001ivs.5:299 ENST00000361642.9:346 NM_001174093:346 NM_001174096:346 NM_001174095:346 NM_030751:346 uc001ivu.5:346 ENST00000559858.5:386 ENST00000560721.6:386 uc057sol.1:386 uc001ivv.5:386 AK307510:386 AK091478:386 AK299541:386 ENST00000558440.5:387 uc057som.1:387 AK310924:387 AK311137:387 AK314683:387 U12170:387 ENST00000424869.5:390 ENST00000437844.6:390 uc057son.1:390 uc057soo.1:390 AK308822:390 BC009572:390 AL831979:390 BC065705:392 BC112392:393 BC107781:394 ENST00000542815.7:396 uc010qeh.3:396 AK300830:396 D15050:406 AB384934:408 KJ904571:408 U19969:425 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001323645 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6 |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
