Difference between revisions of "TSS:Hg 104608.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=71 |entrez_id=6935 |gc_percent=0.442786 |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |gene_description=zi...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BZP= | ||
| + | |DELTAEF1= | ||
| + | |FECD6= | ||
| + | |NIL2A= | ||
| + | |PPCD3= | ||
| + | |TCF8= | ||
| + | |ZFHEP= | ||
| + | |ZFHX1A= | ||
| + | |all_trans=AK311201:0 AK311187:-28 ENST00000559476.2:-30 uc057sos.1:-30 ENST00000559496.5:-47 ENST00000446923.6:-47 NM_001174094:-47 NM_001128128:-47 uc009xlm.2:-47 uc009xlp.4:-47 AK311557:-47 AK311116:169 ENST00000557827.5:244 uc009xln.2:244 AK308785:244 AK296244:262 ENST00000606671.5:391 uc057sot.1:391 ENST00000606161.1:460 uc057sou.1:460 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=0 | ||
|distance_to_tss=71 | |distance_to_tss=71 | ||
| + | |end=31321230 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | ||
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
| − | |gene_name=ZEB1 | + | |gene_id=6935 |
| + | |gene_name=zinc finger E-box binding homeobox 1 | ||
| + | |gene_source=HGNC:11642 | ||
| + | |gene_symbol=ZEB1 | ||
| + | |gene_synonyms=AREB6 BZP FECD6 NIL-2-A ZEB Zfhep Zfhx1a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
|nearest_promoter_id=NM_001323664 | |nearest_promoter_id=NM_001323664 | ||
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=31321181 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK311201 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104608.1 | |tss_id=hg_104608.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK311201 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | AK311201:0 AK311187:-28 ENST00000559476.2:-30 uc057sos.1:-30 ENST00000559496.5:-47 ENST00000446923.6:-47 NM_001174094:-47 NM_001128128:-47 uc009xlm.2:-47 uc009xlp.4:-47 AK311557:-47 AK311116:169 ENST00000557827.5:244 uc009xln.2:244 AK308785:244 AK296244:262 ENST00000606671.5:391 uc057sot.1:391 ENST00000606161.1:460 uc057sou.1:460 |
TATA-Box annotation
| Distance to TSS: | 71 |
|---|---|
| Nearest PromoterID: | NM_001323664 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6 |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
