Difference between revisions of "TSS:Hg 104609.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=43 |entrez_id=6935 |gc_percent=0.412935 |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |gene_description=zin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BZP= | ||
| + | |DELTAEF1= | ||
| + | |FECD6= | ||
| + | |NIL2A= | ||
| + | |PPCD3= | ||
| + | |TCF8= | ||
| + | |ZFHEP= | ||
| + | |ZFHX1A= | ||
| + | |all_trans=ENST00000606161.1:18 uc057sou.1:18 ENST00000606671.5:-35 uc057sot.1:-35 AK296244:-164 ENST00000557827.5:-182 uc009xln.2:-182 AK308785:-182 AK311116:-257 ENST00000558832.5:338 uc057sov.1:338 AK311201:-468 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=18 | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
| + | |end=31321672 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | ||
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
| − | |gene_name=ZEB1 | + | |gene_id=6935 |
| + | |gene_name=zinc finger E-box binding homeobox 1 | ||
| + | |gene_source=HGNC:11642 | ||
| + | |gene_symbol=ZEB1 | ||
| + | |gene_synonyms=AREB6 BZP FECD6 NIL-2-A ZEB Zfhep Zfhx1a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
|nearest_promoter_id=NM_001323675 | |nearest_promoter_id=NM_001323675 | ||
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=31321655 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000606161.1 uc057sou.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104609.1 | |tss_id=hg_104609.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000606161.1 uc057sou.1 |
|---|---|
| Distance: | 18 |
| Num_trans: | 12 |
| All_trans: | ENST00000606161.1:18 uc057sou.1:18 ENST00000606671.5:-35 uc057sot.1:-35 AK296244:-164 ENST00000557827.5:-182 uc009xln.2:-182 AK308785:-182 AK311116:-257 ENST00000558832.5:338 uc057sov.1:338 AK311201:-468 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_001323675 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6 |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
