Difference between revisions of "TSS:Hg 10462.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=60 |entrez_id=79814 |gc_percent=0.726368 |gene_alias=- |gene_description=agmatinase |gene_name=AGMAT |gene_type=protein-coding |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK027037:0 AK130034:0 AK225366:0 AY057097:13 ENST00000375826.3:-26 NM_024758:-26 uc001awv.3:-26 BC005090:-26 KJ899569:49 DQ893530:49 DQ896746:49 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=60 | |distance_to_tss=60 | ||
| + | |end=15585084 | ||
|entrez_id=79814 | |entrez_id=79814 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=agmatinase | |gene_description=agmatinase | ||
| − | |gene_name=AGMAT | + | |gene_id=79814 |
| + | |gene_name=agmatinase | ||
| + | |gene_source=HGNC:18407 | ||
| + | |gene_symbol=AGMAT | ||
| + | |gene_synonyms=FLJ23384 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18407 | ||
|nearest_ensembl=ENSG00000116771 | |nearest_ensembl=ENSG00000116771 | ||
|nearest_promoter_id=NM_024758 | |nearest_promoter_id=NM_024758 | ||
|nearest_refseq=NM_024758 | |nearest_refseq=NM_024758 | ||
|nearest_unigene=Hs.461532 | |nearest_unigene=Hs.461532 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=15585015 | ||
| + | |strand=- | ||
| + | |transcript_name=AK027037 AK130034 AK225366 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10462.1 | |tss_id=hg_10462.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK027037 AK130034 AK225366 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | AK027037:0 AK130034:0 AK225366:0 AY057097:13 ENST00000375826.3:-26 NM_024758:-26 uc001awv.3:-26 BC005090:-26 KJ899569:49 DQ893530:49 DQ896746:49 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_024758 |
| Entrez ID: | 79814 |
| Nearest Unigene: | Hs.461532 |
| Nearest Refseq: | NM_024758 |
| Nearest Ensembl: | ENSG00000116771 |
| Gene Name: | agmatinase |
| Gene Alias: | - |
| Gene Description: | agmatinase |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
