Difference between revisions of "TSS:Hg 104675.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=11 |entrez_id=1390 |gc_percent=0.41791 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000497686.1:-11 NM_001267565:-11 NM_001267564:-11 NM_182772:-11 NM_182771:-11 uc057ssx.1:-11 ENST00000361599.8:-34 uc001iyf.4:-34 AF417234:-34 ENST00000484283.5:176 ENST00000395887.7:176 uc031pty.2:176 uc057ssy.1:176 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-11 | ||
|distance_to_tss=11 | |distance_to_tss=11 | ||
| + | |end=35167550 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_001267564 | |nearest_promoter_id=NM_001267564 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=35167549 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000497686.1 NM_001267565 NM_001267564 NM_182772 NM_182771 uc057ssx.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104675.1 | |tss_id=hg_104675.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000497686.1 NM_001267565 NM_001267564 NM_182772 NM_182771 uc057ssx.1 |
|---|---|
| Distance: | -11 |
| Num_trans: | 13 |
| All_trans: | ENST00000497686.1:-11 NM_001267565:-11 NM_001267564:-11 NM_182772:-11 NM_182771:-11 uc057ssx.1:-11 ENST00000361599.8:-34 uc001iyf.4:-34 AF417234:-34 ENST00000484283.5:176 ENST00000395887.7:176 uc031pty.2:176 uc057ssy.1:176 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NM_001267564 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
