Difference between revisions of "TSS:Hg 104677.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=16 |entrez_id=1390 |gc_percent=0.437811 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000494479.5:0 ENST00000463314.5:0 ENST00000342105.7:0 ENST00000374711.5:0 ENST00000495301.1:0 NM_001267567:0 NM_001267566:0 NM_182770:0 NM_182769:0 uc057ssz.1:0 uc031pua.2:0 uc001iyh.4:0 uc057sta.1:0 uc057stb.1:0 AF417233:0 AY292864:0 BC090051:0 AK301906:2 ENST00000472813.1:233 uc057stc.1:233 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=0 | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
| + | |end=35175620 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_182769 | |nearest_promoter_id=NM_182769 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=35175585 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000494479.5 ENST00000463314.5 ENST00000342105.7 ENST00000374711.5 ENST00000495301.1 NM_001267567 NM_001267566 NM_182770 NM_182769 uc057ssz.1 uc031pua.2 uc001iyh.4 uc057sta.1 uc057stb.1 AF417233 AY292864 BC090051 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104677.1 | |tss_id=hg_104677.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9J2J0 C9J5A7 Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000494479.5 ENST00000463314.5 ENST00000342105.7 ENST00000374711.5 ENST00000495301.1 NM_001267567 NM_001267566 NM_182770 NM_182769 uc057ssz.1 uc031pua.2 uc001iyh.4 uc057sta.1 uc057stb.1 AF417233 AY292864 BC090051 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000494479.5:0 ENST00000463314.5:0 ENST00000342105.7:0 ENST00000374711.5:0 ENST00000495301.1:0 NM_001267567:0 NM_001267566:0 NM_182770:0 NM_182769:0 uc057ssz.1:0 uc031pua.2:0 uc001iyh.4:0 uc057sta.1:0 uc057stb.1:0 AF417233:0 AY292864:0 BC090051:0 AK301906:2 ENST00000472813.1:233 uc057stc.1:233 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_182769 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
