Difference between revisions of "TSS:Hg 104678.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=9280 |entrez_id=1390 |gc_percent=0.343284 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |g...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=9280 | |distance_to_tss=9280 | ||
| + | |end=35184875 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.343284 | |gc_percent=0.343284 | ||
| Line 8: | Line 12: | ||
|gene_name=CREM | |gene_name=CREM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_182769 | |nearest_promoter_id=NM_182769 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=35184859 | ||
| + | |strand=+ | ||
|tata_box="-30(ACCTATTTAGGG,-,0.00),28(TTATTTAAAAGC,-,0.00)" | |tata_box="-30(ACCTATTTAGGG,-,0.00),28(TTATTTAAAAGC,-,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104678.1 | |tss_id=hg_104678.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9280 |
|---|---|
| Nearest PromoterID: | NM_182769 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | CREM |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-30(ACCTATTTAGGG,-,0.00),28(TTATTTAAAAGC,-,0.00)" |
