Difference between revisions of "TSS:Hg 104687.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.18 |distance_to_tss=-218 |entrez_id=219771 |gc_percent=0.800995 |gene_alias=C10orf9|CBCP1|CCNX|CFP1 |gene_description=cyclin Y |gene_name=CCNY |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CBCP1= | ||
| + | |CCNX= | ||
| + | |CFP1= | ||
| + | |all_trans=AK314666:-94 ENST00000374704.7:183 ENST00000265375.13:183 ENST00000339497.7:183 NM_001282852:183 NM_001282854:183 NM_001282853:183 NM_145012:183 uc001iyw.6:183 uc001iyx.6:183 uc009xmb.5:183 AF413522:183 AY504868:183 AK303283:329 AL834355:336 BC094815:344 BC069224:357 ENST00000492478.5:361 uc057stn.1:361 BC050310:361 AF465728:362 AF465729:362 AB462996:363 AM392857:363 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
| + | |distance=-94 | ||
|distance_to_tss=-218 | |distance_to_tss=-218 | ||
| + | |end=35336691 | ||
|entrez_id=219771 | |entrez_id=219771 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=C10orf9|CBCP1|CCNX|CFP1 | |gene_alias=C10orf9|CBCP1|CCNX|CFP1 | ||
|gene_description=cyclin Y | |gene_description=cyclin Y | ||
| − | |gene_name=CCNY | + | |gene_id=219771 |
| + | |gene_name=cyclin Y | ||
| + | |gene_source=HGNC:23354 | ||
| + | |gene_symbol=CCNY | ||
| + | |gene_synonyms=CBCP1 CFP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23354 | ||
|nearest_ensembl=ENSG00000108100 | |nearest_ensembl=ENSG00000108100 | ||
|nearest_promoter_id=NM_145012 | |nearest_promoter_id=NM_145012 | ||
|nearest_refseq=NM_145012 | |nearest_refseq=NM_145012 | ||
|nearest_unigene=Hs.14745 | |nearest_unigene=Hs.14745 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=35336620 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK314666 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104687.1 | |tss_id=hg_104687.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2RBH6 | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK314666 |
|---|---|
| Distance: | -94 |
| Num_trans: | 24 |
| All_trans: | AK314666:-94 ENST00000374704.7:183 ENST00000265375.13:183 ENST00000339497.7:183 NM_001282852:183 NM_001282854:183 NM_001282853:183 NM_145012:183 uc001iyw.6:183 uc001iyx.6:183 uc009xmb.5:183 AF413522:183 AY504868:183 AK303283:329 AL834355:336 BC094815:344 BC069224:357 ENST00000492478.5:361 uc057stn.1:361 BC050310:361 AF465728:362 AF465729:362 AB462996:363 AM392857:363 |
TATA-Box annotation
| Distance to TSS: | -218 |
|---|---|
| Nearest PromoterID: | NM_145012 |
| Entrez ID: | 219771 |
| Nearest Unigene: | Hs.14745 |
| Nearest Refseq: | NM_145012 |
| Nearest Ensembl: | ENSG00000108100 |
| Gene Name: | cyclin Y |
| Gene Alias: | C10orf9 |
| Gene Description: | cyclin Y |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
