Difference between revisions of "TSS:Hg 104689.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=286 |entrez_id=219771 |gc_percent=0.676617 |gene_alias=C10orf9|CBCP1|CCNX|CFP1 |gene_description=cyclin Y |gene_name=CCNY |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CBCP1= | ||
| + | |CCNX= | ||
| + | |CFP1= | ||
| + | |all_trans=AB462996:-105 AM392857:-105 AF465728:-106 AF465729:-106 ENST00000492478.5:-107 uc057stn.1:-107 BC050310:-107 BC069224:-111 BC094815:-124 AL834355:-132 AK303283:-139 ENST00000374704.7:-285 ENST00000265375.13:-285 ENST00000339497.7:-285 NM_001282852:-285 NM_001282854:-285 NM_001282853:-285 NM_145012:-285 uc001iyw.6:-285 uc001iyx.6:-285 uc009xmb.5:-285 AF413522:-285 AY504868:-285 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=-105 | ||
|distance_to_tss=286 | |distance_to_tss=286 | ||
| + | |end=35337161 | ||
|entrez_id=219771 | |entrez_id=219771 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=C10orf9|CBCP1|CCNX|CFP1 | |gene_alias=C10orf9|CBCP1|CCNX|CFP1 | ||
|gene_description=cyclin Y | |gene_description=cyclin Y | ||
| − | |gene_name=CCNY | + | |gene_id=219771 |
| + | |gene_name=cyclin Y | ||
| + | |gene_source=HGNC:23354 | ||
| + | |gene_symbol=CCNY | ||
| + | |gene_synonyms=CBCP1 CFP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23354 | ||
|nearest_ensembl=ENSG00000108100 | |nearest_ensembl=ENSG00000108100 | ||
|nearest_promoter_id=NM_001282853 | |nearest_promoter_id=NM_001282853 | ||
|nearest_refseq=NM_145012 | |nearest_refseq=NM_145012 | ||
|nearest_unigene=Hs.14745 | |nearest_unigene=Hs.14745 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=35337158 | ||
| + | |strand=+ | ||
| + | |transcript_name=AB462996 AM392857 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104689.1 | |tss_id=hg_104689.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB462996 AM392857 |
|---|---|
| Distance: | -105 |
| Num_trans: | 23 |
| All_trans: | AB462996:-105 AM392857:-105 AF465728:-106 AF465729:-106 ENST00000492478.5:-107 uc057stn.1:-107 BC050310:-107 BC069224:-111 BC094815:-124 AL834355:-132 AK303283:-139 ENST00000374704.7:-285 ENST00000265375.13:-285 ENST00000339497.7:-285 NM_001282852:-285 NM_001282854:-285 NM_001282853:-285 NM_145012:-285 uc001iyw.6:-285 uc001iyx.6:-285 uc009xmb.5:-285 AF413522:-285 AY504868:-285 |
TATA-Box annotation
| Distance to TSS: | 286 |
|---|---|
| Nearest PromoterID: | NM_001282853 |
| Entrez ID: | 219771 |
| Nearest Unigene: | Hs.14745 |
| Nearest Refseq: | NM_145012 |
| Nearest Ensembl: | ENSG00000108100 |
| Gene Name: | cyclin Y |
| Gene Alias: | C10orf9 |
| Gene Description: | cyclin Y |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
