Difference between revisions of "TSS:Hg 104698.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-66 |entrez_id=219770 |gc_percent=0.542289 |gene_alias=CX40.1 |gene_description=gap junction protein delta 4 |gene_name=GJD4 |ge...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000321660.1:59 NM_153368:59 uc001iyy.1:59 AK074504:59 BC156174:216 BC157014:216 BC160130:216 AJ414564:217 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=59 | ||
|distance_to_tss=-66 | |distance_to_tss=-66 | ||
| + | |end=35605351 | ||
|entrez_id=219770 | |entrez_id=219770 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=CX40.1 | |gene_alias=CX40.1 | ||
|gene_description=gap junction protein delta 4 | |gene_description=gap junction protein delta 4 | ||
| − | |gene_name=GJD4 | + | |gene_id=219770 |
| + | |gene_name=gap junction protein delta 4 | ||
| + | |gene_source=HGNC:23296 | ||
| + | |gene_symbol=GJD4 | ||
| + | |gene_synonyms=CX40.1 FLJ90023 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23296 | ||
|nearest_ensembl=ENSG00000177291 | |nearest_ensembl=ENSG00000177291 | ||
|nearest_promoter_id=NM_153368 | |nearest_promoter_id=NM_153368 | ||
|nearest_refseq=NM_153368 | |nearest_refseq=NM_153368 | ||
|nearest_unigene=Hs.638922 | |nearest_unigene=Hs.638922 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=35605336 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000321660.1 NM_153368 uc001iyy.1 AK074504 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104698.1 | |tss_id=hg_104698.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96KN9 | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000321660.1 NM_153368 uc001iyy.1 AK074504 |
|---|---|
| Distance: | 59 |
| Num_trans: | 8 |
| All_trans: | ENST00000321660.1:59 NM_153368:59 uc001iyy.1:59 AK074504:59 BC156174:216 BC157014:216 BC160130:216 AJ414564:217 |
TATA-Box annotation
| Distance to TSS: | -66 |
|---|---|
| Nearest PromoterID: | NM_153368 |
| Entrez ID: | 219770 |
| Nearest Unigene: | Hs.638922 |
| Nearest Refseq: | NM_153368 |
| Nearest Ensembl: | ENSG00000177291 |
| Gene Name: | gap junction protein delta 4 |
| Gene Alias: | CX40.1 |
| Gene Description: | gap junction protein delta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
