Difference between revisions of "TSS:Hg 104703.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=-258 |entrez_id=91074 |gc_percent=0.626866 |gene_alias=NY-BR-1 |gene_description=ankyrin repeat domain 30A |gene_name=ANKRD30A |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000611781.4:183 uc001iza.2:183 ENST00000374660.5:252 ENST00000361713.1:252 ENST00000602533.5:252 NM_052997:252 uc057sua.1:252 uc057sub.1:252 uc057suc.1:252 AF269087:252 BC172447:351 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=183 | ||
|distance_to_tss=-258 | |distance_to_tss=-258 | ||
| + | |end=37125605 | ||
|entrez_id=91074 | |entrez_id=91074 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=NY-BR-1 | |gene_alias=NY-BR-1 | ||
|gene_description=ankyrin repeat domain 30A | |gene_description=ankyrin repeat domain 30A | ||
| − | |gene_name=ANKRD30A | + | |gene_id=91074 |
| + | |gene_name=ankyrin repeat domain 30A | ||
| + | |gene_source=HGNC:17234 | ||
| + | |gene_symbol=ANKRD30A | ||
| + | |gene_synonyms=NY-BR-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17234 | ||
|nearest_ensembl=ENSG00000148513 | |nearest_ensembl=ENSG00000148513 | ||
|nearest_promoter_id=NM_052997 | |nearest_promoter_id=NM_052997 | ||
|nearest_refseq=NM_052997 | |nearest_refseq=NM_052997 | ||
|nearest_unigene=Hs.373787 | |nearest_unigene=Hs.373787 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=37125593 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000611781.4 uc001iza.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104703.1 | |tss_id=hg_104703.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9BXX3 | ||
}} | }} | ||
Revision as of 21:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000611781.4 uc001iza.2 |
|---|---|
| Distance: | 183 |
| Num_trans: | 11 |
| All_trans: | ENST00000611781.4:183 uc001iza.2:183 ENST00000374660.5:252 ENST00000361713.1:252 ENST00000602533.5:252 NM_052997:252 uc057sua.1:252 uc057sub.1:252 uc057suc.1:252 AF269087:252 BC172447:351 |
TATA-Box annotation
| Distance to TSS: | -258 |
|---|---|
| Nearest PromoterID: | NM_052997 |
| Entrez ID: | 91074 |
| Nearest Unigene: | Hs.373787 |
| Nearest Refseq: | NM_052997 |
| Nearest Ensembl: | ENSG00000148513 |
| Gene Name: | ankyrin repeat domain 30A |
| Gene Alias: | NY-BR-1 |
| Gene Description: | ankyrin repeat domain 30A |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
