Difference between revisions of "TSS:Hg 104721.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-132 |entrez_id=7581 |gc_percent=0.626866 |gene_alias=KOX2|KOX31|KOX5|NF11A|ZNF11|ZNF11A|ZNF33|ZZAPK |gene_description=zinc fin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KOX31= | ||
| + | |KOX5= | ||
| + | |NF11A= | ||
| + | |ZNF11= | ||
| + | |ZNF11A= | ||
| + | |ZNF33= | ||
| + | |ZZAPK= | ||
| + | |all_trans=ENST00000307441.13:128 ENST00000374618.7:128 NM_001278170:128 NM_006954:128 NM_001278179:128 NM_001278178:128 NM_001278177:128 NM_001278176:128 NM_001278175:128 NM_001278174:128 NM_001278173:128 NM_001278171:128 NM_006974:128 uc031puo.2:128 uc031pun.2:128 ENST00000628825.2:133 uc010qev.3:133 AK303445:135 ENST00000432900.6:147 uc001izg.4:147 AK292844:147 ENST00000458705.6:148 uc001izh.4:148 BC017760:159 ENST00000469037.2:164 uc001izi.2:164 AK027057:164 ENST00000476504.5:171 uc057suw.1:171 ENST00000478556.1:177 uc057sux.1:177 D31763:191 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=128 | ||
|distance_to_tss=-132 | |distance_to_tss=-132 | ||
| + | |end=38010522 | ||
|entrez_id=7581 | |entrez_id=7581 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=KOX2|KOX31|KOX5|NF11A|ZNF11|ZNF11A|ZNF33|ZZAPK | |gene_alias=KOX2|KOX31|KOX5|NF11A|ZNF11|ZNF11A|ZNF33|ZZAPK | ||
|gene_description=zinc finger protein 33A | |gene_description=zinc finger protein 33A | ||
| − | |gene_name=ZNF33A | + | |gene_id=7581 |
| + | |gene_name=zinc finger protein 33A | ||
| + | |gene_source=HGNC:13096 | ||
| + | |gene_symbol=ZNF33A | ||
| + | |gene_synonyms=FLJ23404 KIAA0065 KOX31 KOX5 ZZAPK | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13096 | ||
|nearest_ensembl=ENSG00000189180 | |nearest_ensembl=ENSG00000189180 | ||
|nearest_promoter_id=NM_001278174 | |nearest_promoter_id=NM_001278174 | ||
|nearest_refseq=NM_006954 | |nearest_refseq=NM_006954 | ||
|nearest_unigene=Hs.435774 | |nearest_unigene=Hs.435774 | ||
| + | |num_trans=32 | ||
| + | |species=human | ||
| + | |start=38010513 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000307441.13 ENST00000374618.7 NM_001278170 NM_006954 NM_001278179 NM_001278178 NM_001278177 NM_001278176 NM_001278175 NM_001278174 NM_001278173 NM_001278171 NM_006974 uc031puo.2 uc031pun.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104721.1 | |tss_id=hg_104721.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A0A0MR11 A0A0A0MRS1 Q06730 | ||
}} | }} | ||
Revision as of 21:04, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000307441.13 ENST00000374618.7 NM_001278170 NM_006954 NM_001278179 NM_001278178 NM_001278177 NM_001278176 NM_001278175 NM_001278174 NM_001278173 NM_001278171 NM_006974 uc031puo.2 uc031pun.2 |
|---|---|
| Distance: | 128 |
| Num_trans: | 32 |
| All_trans: | ENST00000307441.13:128 ENST00000374618.7:128 NM_001278170:128 NM_006954:128 NM_001278179:128 NM_001278178:128 NM_001278177:128 NM_001278176:128 NM_001278175:128 NM_001278174:128 NM_001278173:128 NM_001278171:128 NM_006974:128 uc031puo.2:128 uc031pun.2:128 ENST00000628825.2:133 uc010qev.3:133 AK303445:135 ENST00000432900.6:147 uc001izg.4:147 AK292844:147 ENST00000458705.6:148 uc001izh.4:148 BC017760:159 ENST00000469037.2:164 uc001izi.2:164 AK027057:164 ENST00000476504.5:171 uc057suw.1:171 ENST00000478556.1:177 uc057sux.1:177 D31763:191 |
TATA-Box annotation
| Distance to TSS: | -132 |
|---|---|
| Nearest PromoterID: | NM_001278174 |
| Entrez ID: | 7581 |
| Nearest Unigene: | Hs.435774 |
| Nearest Refseq: | NM_006954 |
| Nearest Ensembl: | ENSG00000189180 |
| Gene Name: | zinc finger protein 33A |
| Gene Alias: | KOX2 |
| Gene Description: | zinc finger protein 33A |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
