Difference between revisions of "TSS:Hg 104767.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=74 |entrez_id=414260 |gc_percent=0.631841 |gene_alias=C10orf136|bA168P8.1 |gene_description=long intergenic non-protein coding R...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000374432.3:-72 NR_033923:-72 uc021ppi.1:-72 BC017939:-72 | ||
| + | |bA168P8.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-72 | ||
|distance_to_tss=74 | |distance_to_tss=74 | ||
| + | |end=43845383 | ||
|entrez_id=414260 | |entrez_id=414260 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=C10orf136|bA168P8.1 | |gene_alias=C10orf136|bA168P8.1 | ||
|gene_description=long intergenic non-protein coding RNA 619 | |gene_description=long intergenic non-protein coding RNA 619 | ||
| − | |gene_name=LINC00619 | + | |gene_id=414260 |
| + | |gene_name=long intergenic non-protein coding RNA 619 | ||
| + | |gene_source=HGNC:31657 | ||
| + | |gene_symbol=LINC00619 | ||
| + | |gene_synonyms=bA168P8.1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31657 | ||
|nearest_ensembl=ENSG00000204187 | |nearest_ensembl=ENSG00000204187 | ||
|nearest_promoter_id=NR_033923 | |nearest_promoter_id=NR_033923 | ||
|nearest_refseq=NR_033923 | |nearest_refseq=NR_033923 | ||
|nearest_unigene=Hs.351856 | |nearest_unigene=Hs.351856 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=43845377 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000374432.3 NR_033923 uc021ppi.1 BC017939 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104767.1 | |tss_id=hg_104767.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374432.3 NR_033923 uc021ppi.1 BC017939 |
|---|---|
| Distance: | -72 |
| Num_trans: | 4 |
| All_trans: | ENST00000374432.3:-72 NR_033923:-72 uc021ppi.1:-72 BC017939:-72 |
TATA-Box annotation
| Distance to TSS: | 74 |
|---|---|
| Nearest PromoterID: | NR_033923 |
| Entrez ID: | 414260 |
| Nearest Unigene: | Hs.351856 |
| Nearest Refseq: | NR_033923 |
| Nearest Ensembl: | ENSG00000204187 |
| Gene Name: | long intergenic non-protein coding RNA 619 |
| Gene Alias: | C10orf136 |
| Gene Description: | long intergenic non-protein coding RNA 619 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
