Difference between revisions of "TSS:Hg 10477.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-12053 |entrez_id=23013 |gc_percent=0.572139 |gene_alias=HIAA0929|MINT|RBM15C|SHARP |gene_description=spen family transcription...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MINT= | ||
| + | |RBM15C= | ||
| + | |SHARP= | ||
| + | |all_trans=AK094772:-38 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-38 | ||
|distance_to_tss=-12053 | |distance_to_tss=-12053 | ||
| + | |end=15835822 | ||
|entrez_id=23013 | |entrez_id=23013 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=HIAA0929|MINT|RBM15C|SHARP | |gene_alias=HIAA0929|MINT|RBM15C|SHARP | ||
|gene_description=spen family transcriptional repressor | |gene_description=spen family transcriptional repressor | ||
| − | |gene_name= | + | |gene_id=729614 |
| + | |gene_name=uncharacterized LOC729614 | ||
| + | |gene_source=EntrezGene:729614 | ||
| + | |gene_symbol=FLJ37453 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000065526 | |nearest_ensembl=ENSG00000065526 | ||
|nearest_promoter_id=NM_015001 | |nearest_promoter_id=NM_015001 | ||
|nearest_refseq=NM_015001 | |nearest_refseq=NM_015001 | ||
|nearest_unigene=Hs.744843 | |nearest_unigene=Hs.744843 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=15835800 | ||
| + | |strand=- | ||
| + | |transcript_name=AK094772 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10477.1 | |tss_id=hg_10477.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N9F6 | ||
}} | }} | ||
Revision as of 21:06, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK094772 |
|---|---|
| Distance: | -38 |
| Num_trans: | 1 |
| All_trans: | AK094772:-38 |
TATA-Box annotation
| Distance to TSS: | -12053 |
|---|---|
| Nearest PromoterID: | NM_015001 |
| Entrez ID: | 23013 |
| Nearest Unigene: | Hs.744843 |
| Nearest Refseq: | NM_015001 |
| Nearest Ensembl: | ENSG00000065526 |
| Gene Name: | uncharacterized LOC729614 |
| Gene Alias: | HIAA0929 |
| Gene Description: | spen family transcriptional repressor |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
