Difference between revisions of "TSS:Hg 104786.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=73 |entrez_id=338579 |gc_percent=0.467662 |gene_alias=- |gene_description=ankyrin repeat domain 30B pseudogene 3 |gene_name=ANKR...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC031237:-24 NR_033891:-67 AK098688:-67 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-24 | ||
|distance_to_tss=73 | |distance_to_tss=73 | ||
| + | |end=45154741 | ||
|entrez_id=338579 | |entrez_id=338579 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=ankyrin repeat domain 30B pseudogene 3 | |gene_description=ankyrin repeat domain 30B pseudogene 3 | ||
| − | |gene_name=ANKRD30BP3 | + | |gene_id=338579 |
| + | |gene_name=ankyrin repeat domain 30B pseudogene 3 | ||
| + | |gene_source=HGNC:27873 | ||
| + | |gene_symbol=ANKRD30BP3 | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:27873 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_033891 | |nearest_promoter_id=NR_033891 | ||
|nearest_refseq=NR_033891 | |nearest_refseq=NR_033891 | ||
|nearest_unigene=Hs.666134 | |nearest_unigene=Hs.666134 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=45154728 | ||
| + | |strand=+ | ||
|tata_box="29(GACTATAAAGAC,-,0.00)" | |tata_box="29(GACTATAAAGAC,-,0.00)" | ||
| + | |transcript_name=BC031237 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104786.1 | |tss_id=hg_104786.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q4G132 | ||
}} | }} | ||
Revision as of 21:07, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC031237 |
|---|---|
| Distance: | -24 |
| Num_trans: | 3 |
| All_trans: | BC031237:-24 NR_033891:-67 AK098688:-67 |
TATA-Box annotation
| Distance to TSS: | 73 |
|---|---|
| Nearest PromoterID: | NR_033891 |
| Entrez ID: | 338579 |
| Nearest Unigene: | Hs.666134 |
| Nearest Refseq: | NR_033891 |
| Nearest Ensembl: | |
| Gene Name: | ankyrin repeat domain 30B pseudogene 3 |
| Gene Alias: | - |
| Gene Description: | ankyrin repeat domain 30B pseudogene 3 |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "29(GACTATAAAGAC,-,0.00)" |
