Difference between revisions of "TSS:Hg 104838.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-33 |entrez_id=107001062 |gc_percent=0.557214 |gene_alias=- |gene_description=uncharacterized LOC107001062 |gene_name=LOC1070010...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_134500:19 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=19 | ||
|distance_to_tss=-33 | |distance_to_tss=-33 | ||
| + | |end=47407146 | ||
|entrez_id=107001062 | |entrez_id=107001062 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC107001062 | |gene_description=uncharacterized LOC107001062 | ||
| − | |gene_name=LOC107001062 | + | |gene_id=107001062 |
| + | |gene_name=uncharacterized LOC107001062 | ||
| + | |gene_source=EntrezGene:107001062 | ||
| + | |gene_symbol=LOC107001062 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_134500 | |nearest_promoter_id=NR_134500 | ||
|nearest_refseq=NR_134500 | |nearest_refseq=NR_134500 | ||
|nearest_unigene=Hs.576719 | |nearest_unigene=Hs.576719 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=47407118 | ||
| + | |strand=+ | ||
| + | |transcript_name=NR_134500 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104838.1 | |tss_id=hg_104838.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:09, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_134500 |
|---|---|
| Distance: | 19 |
| Num_trans: | 1 |
| All_trans: | NR_134500:19 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NR_134500 |
| Entrez ID: | 107001062 |
| Nearest Unigene: | Hs.576719 |
| Nearest Refseq: | NR_134500 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC107001062 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC107001062 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
