Difference between revisions of "TSS:Hg 104918.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-26879 |entrez_id=5592 |gc_percent=0.482587 |gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha |gene_d...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PKG= | ||
| + | |PRKG1B= | ||
| + | |PRKGR1B= | ||
| + | |all_trans=ENST00000561565.1:0 uc001jjl.3:0 BC036363:0 BC044765:0 | ||
| + | |cGK= | ||
| + | |cGK 1= | ||
| + | |cGK1= | ||
| + | |cGKI= | ||
| + | |cGKI-BETA= | ||
| + | |cGKI-alpha= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=-26879 | |distance_to_tss=-26879 | ||
| + | |end=50964275 | ||
|entrez_id=5592 | |entrez_id=5592 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| Line 12: | Line 25: | ||
|nearest_refseq=NM_006258 | |nearest_refseq=NM_006258 | ||
|nearest_unigene=Hs.407535 | |nearest_unigene=Hs.407535 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=50964268 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000561565.1 uc001jjl.3 BC036363 BC044765 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104918.1 | |tss_id=hg_104918.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000561565.1 uc001jjl.3 BC036363 BC044765 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000561565.1:0 uc001jjl.3:0 BC036363:0 BC044765:0 |
TATA-Box annotation
| Distance to TSS: | -26879 |
|---|---|
| Nearest PromoterID: | NM_001098512 |
| Entrez ID: | 5592 |
| Nearest Unigene: | Hs.407535 |
| Nearest Refseq: | NM_006258 |
| Nearest Ensembl: | ENSG00000185532 |
| Gene Name: | PRKG1 |
| Gene Alias: | AAT8 |
| Gene Description: | "protein kinase, cGMP-dependent, type I" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
