Difference between revisions of "TSS:Hg 100306.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=867 |entrez_id=286319 |gc_percent=0.721393 |gene_alias=TSG-9|TSG9 |gene_description=tumor suppressor candidate 1 |gene_name=TUSC...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TSG9= | ||
| + | |all_trans=BC028316:19 BC036931:39 BC017510:-223 BC046919:-289 ENST00000358022.4:-430 uc003zpx.4:-430 AY168647:-430 BC110824:-430 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=19 | ||
|distance_to_tss=867 | |distance_to_tss=867 | ||
| + | |end=25678010 | ||
|entrez_id=286319 | |entrez_id=286319 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=TSG-9|TSG9 | |gene_alias=TSG-9|TSG9 | ||
|gene_description=tumor suppressor candidate 1 | |gene_description=tumor suppressor candidate 1 | ||
| − | |gene_name=TUSC1 | + | |gene_id=286319 |
| + | |gene_name=tumor suppressor candidate 1 | ||
| + | |gene_source=HGNC:31010 | ||
| + | |gene_symbol=TUSC1 | ||
| + | |gene_synonyms=TSG-9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31010 | ||
|nearest_ensembl=ENSG00000198680 | |nearest_ensembl=ENSG00000198680 | ||
|nearest_promoter_id=NM_001004125 | |nearest_promoter_id=NM_001004125 | ||
|nearest_refseq=NM_001004125 | |nearest_refseq=NM_001004125 | ||
|nearest_unigene=Hs.26268 | |nearest_unigene=Hs.26268 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=25677972 | ||
| + | |strand=- | ||
| + | |transcript_name=BC028316 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100306.1 | |tss_id=hg_100306.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC028316 |
|---|---|
| Distance: | 19 |
| Num_trans: | 8 |
| All_trans: | BC028316:19 BC036931:39 BC017510:-223 BC046919:-289 ENST00000358022.4:-430 uc003zpx.4:-430 AY168647:-430 BC110824:-430 |
TATA-Box annotation
| Distance to TSS: | 867 |
|---|---|
| Nearest PromoterID: | NM_001004125 |
| Entrez ID: | 286319 |
| Nearest Unigene: | Hs.26268 |
| Nearest Refseq: | NM_001004125 |
| Nearest Ensembl: | ENSG00000198680 |
| Gene Name: | tumor suppressor candidate 1 |
| Gene Alias: | TSG-9 |
| Gene Description: | tumor suppressor candidate 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
