Difference between revisions of "TSS:Hg 105173.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-3445 |entrez_id=105378330 |gc_percent=0.502488 |gene_alias=- |gene_description=uncharacterized LOC105378330 |gene_name=LOC10537...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000450055.1:167 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=167 | ||
|distance_to_tss=-3445 | |distance_to_tss=-3445 | ||
| + | |end=63427130 | ||
|entrez_id=105378330 | |entrez_id=105378330 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC105378330 | |gene_description=uncharacterized LOC105378330 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=PRELI domain containing 1 pseudogene 3 | ||
| + | |gene_source=HGNC:43888 | ||
| + | |gene_symbol=PRELID1P3 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:43888 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_134312 | |nearest_promoter_id=NR_134312 | ||
|nearest_refseq=NR_134312 | |nearest_refseq=NR_134312 | ||
|nearest_unigene=Hs.602852 | |nearest_unigene=Hs.602852 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=63427129 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000450055.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105173.1 | |tss_id=hg_105173.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:24, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000450055.1 |
|---|---|
| Distance: | 167 |
| Num_trans: | 1 |
| All_trans: | ENST00000450055.1:167 |
TATA-Box annotation
| Distance to TSS: | -3445 |
|---|---|
| Nearest PromoterID: | NR_134312 |
| Entrez ID: | 105378330 |
| Nearest Unigene: | Hs.602852 |
| Nearest Refseq: | NR_134312 |
| Nearest Ensembl: | |
| Gene Name: | PRELI domain containing 1 pseudogene 3 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105378330 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
