Difference between revisions of "TSS:Hg 105285.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=16 |entrez_id=26128 |gc_percent=0.557214 |gene_alias=KBP|KIAA1279|TTC20 |gene_description=KIF1 binding protein |gene_name=KIF1BP...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KIAA1279= | ||
| + | |TTC20= | ||
| + | |all_trans=ENST00000361983.6:-11 NM_015634:-11 uc001joy.4:-11 BC006427:56 AB033105:56 ENST00000626493.1:64 uc057tsk.1:64 AK291343:74 BC012180:82 AB384169:91 KJ893525:91 ENST00000625461.1:375 uc057tsl.1:375 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=-11 | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
| + | |end=68988742 | ||
|entrez_id=26128 | |entrez_id=26128 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=KBP|KIAA1279|TTC20 | |gene_alias=KBP|KIAA1279|TTC20 | ||
|gene_description=KIF1 binding protein | |gene_description=KIF1 binding protein | ||
| − | |gene_name=KIF1BP | + | |gene_id=26128 |
| + | |gene_name=KIF1 binding protein | ||
| + | |gene_source=HGNC:23419 | ||
| + | |gene_symbol=KIF1BP | ||
| + | |gene_synonyms=DKFZP586B0923 KBP TTC20 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23419 | ||
|nearest_ensembl=ENSG00000198954 | |nearest_ensembl=ENSG00000198954 | ||
|nearest_promoter_id=NM_015634 | |nearest_promoter_id=NM_015634 | ||
|nearest_refseq=NM_015634 | |nearest_refseq=NM_015634 | ||
|nearest_unigene=Hs.279580 | |nearest_unigene=Hs.279580 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=68988731 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000361983.6 NM_015634 uc001joy.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105285.1 | |tss_id=hg_105285.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96EK5 | ||
}} | }} | ||
Revision as of 21:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000361983.6 NM_015634 uc001joy.4 |
|---|---|
| Distance: | -11 |
| Num_trans: | 13 |
| All_trans: | ENST00000361983.6:-11 NM_015634:-11 uc001joy.4:-11 BC006427:56 AB033105:56 ENST00000626493.1:64 uc057tsk.1:64 AK291343:74 BC012180:82 AB384169:91 KJ893525:91 ENST00000625461.1:375 uc057tsl.1:375 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_015634 |
| Entrez ID: | 26128 |
| Nearest Unigene: | Hs.279580 |
| Nearest Refseq: | NM_015634 |
| Nearest Ensembl: | ENSG00000198954 |
| Gene Name: | KIF1 binding protein |
| Gene Alias: | KBP |
| Gene Description: | KIF1 binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
