Difference between revisions of "TSS:Hg 132830.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC037346:-33 |chr=chr12 |cpg_percent=0.105 |distance=-33 |distance_to_tss=-140 |end=98515441 |entrez_id=7112 |gc_percent=0.621891 |gene_alias=CMD1T|LAP2...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |LAP2= | ||
| + | |LEMD4= | ||
| + | |PRO0868= | ||
| + | |TP= | ||
|all_trans=BC037346:-33 | |all_trans=BC037346:-33 | ||
|chr=chr12 | |chr=chr12 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-140 | |distance_to_tss=-140 | ||
|end=98515441 | |end=98515441 | ||
| + | |end_of_center_position=98515434 | ||
|entrez_id=7112 | |entrez_id=7112 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CMD1T | + | |gene_alias=CMD1T |
|gene_description=thymopoietin | |gene_description=thymopoietin | ||
|gene_id=100128191 | |gene_id=100128191 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=98515425 | |start=98515425 | ||
| + | |start_of_center_position=98515433 | ||
|strand=- | |strand=- | ||
|tata_box="-34(CAGTTTAAAAGG,-,0.00)" | |tata_box="-34(CAGTTTAAAAGG,-,0.00)" | ||
Revision as of 12:44, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98515433 |
|---|---|
| End of the center position in the TSS region: | 98515434 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC037346 |
|---|---|
| Distance: | -33 |
| Num_trans: | 1 |
| All_trans: | BC037346:-33 |
TATA-Box annotation
| Distance to TSS: | -140 |
|---|---|
| Nearest PromoterID: | NM_001307975 |
| Entrez ID: | 7112 |
| Nearest Unigene: | Hs.11355 |
| Nearest Refseq: | NM_003276 |
| Nearest Ensembl: | ENSG00000120802 |
| Gene Name: | TMPO antisense RNA 1 |
| Gene Alias: | CMD1T |
| Gene Description: | thymopoietin |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(CAGTTTAAAAGG,-,0.00)" |
