Difference between revisions of "TSS:Hg 105298.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=140 |entrez_id=5552 |gc_percent=0.402985 |gene_alias=PPG|PRG|PRG1 |gene_description=serglycin |gene_name=SRGN |gene_type=protein...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PRG= | ||
| + | |PRG1= | ||
| + | |all_trans=DQ894620:313 DQ891442:313 NM_002727:479 NR_036430:479 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=313 | ||
|distance_to_tss=140 | |distance_to_tss=140 | ||
| + | |end=69087593 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=PPG|PRG|PRG1 | |gene_alias=PPG|PRG|PRG1 | ||
|gene_description=serglycin | |gene_description=serglycin | ||
| − | |gene_name=SRGN | + | |gene_id=5552 |
| + | |gene_name=serglycin | ||
| + | |gene_source=HGNC:9361 | ||
| + | |gene_symbol=SRGN | ||
| + | |gene_synonyms=PPG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9361 | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
|nearest_promoter_id=NM_001321053 | |nearest_promoter_id=NM_001321053 | ||
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=69087578 | ||
| + | |strand=+ | ||
| + | |transcript_name=DQ894620 DQ891442 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105298.1 | |tss_id=hg_105298.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:29, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | DQ894620 DQ891442 |
|---|---|
| Distance: | 313 |
| Num_trans: | 4 |
| All_trans: | DQ894620:313 DQ891442:313 NM_002727:479 NR_036430:479 |
TATA-Box annotation
| Distance to TSS: | 140 |
|---|---|
| Nearest PromoterID: | NM_001321053 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
