Difference between revisions of "TSS:Hg 105300.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=190 |entrez_id=5552 |gc_percent=0.363184 |gene_alias=PPG|PRG|PRG1 |gene_description=serglycin |gene_name=SRGN |gene_type=protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PRG= | ||
| + | |PRG1= | ||
| + | |all_trans=DQ894620:264 DQ891442:264 NM_002727:430 NR_036430:430 D28395:461 ENST00000462445.1:464 uc057tso.1:464 BC022313:470 AK311873:474 ENST00000242465.3:476 uc001joz.4:476 BC015516:476 J03223:485 X17042:499 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=264 | ||
|distance_to_tss=190 | |distance_to_tss=190 | ||
| + | |end=69087642 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias=PPG|PRG|PRG1 | |gene_alias=PPG|PRG|PRG1 | ||
|gene_description=serglycin | |gene_description=serglycin | ||
| − | |gene_name=SRGN | + | |gene_id=5552 |
| + | |gene_name=serglycin | ||
| + | |gene_source=HGNC:9361 | ||
| + | |gene_symbol=SRGN | ||
| + | |gene_synonyms=PPG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9361 | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
|nearest_promoter_id=NM_001321053 | |nearest_promoter_id=NM_001321053 | ||
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=69087630 | ||
| + | |strand=+ | ||
| + | |transcript_name=DQ894620 DQ891442 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105300.1 | |tss_id=hg_105300.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:29, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ894620 DQ891442 |
|---|---|
| Distance: | 264 |
| Num_trans: | 14 |
| All_trans: | DQ894620:264 DQ891442:264 NM_002727:430 NR_036430:430 D28395:461 ENST00000462445.1:464 uc057tso.1:464 BC022313:470 AK311873:474 ENST00000242465.3:476 uc001joz.4:476 BC015516:476 J03223:485 X17042:499 |
TATA-Box annotation
| Distance to TSS: | 190 |
|---|---|
| Nearest PromoterID: | NM_001321053 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
