Difference between revisions of "TSS:Hg 105303.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=644 |entrez_id=5552 |gc_percent=0.383085 |gene_alias=PPG|PRG|PRG1 |gene_description=serglycin |gene_name=SRGN |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PRG= | ||
| + | |PRG1= | ||
| + | |all_trans=AB528400:-497 CU677333:-497 KJ897372:-497 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-497 | ||
|distance_to_tss=644 | |distance_to_tss=644 | ||
| + | |end=69088690 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
|gene_alias=PPG|PRG|PRG1 | |gene_alias=PPG|PRG|PRG1 | ||
|gene_description=serglycin | |gene_description=serglycin | ||
| − | |gene_name=SRGN | + | |gene_id=5552 |
| + | |gene_name=serglycin | ||
| + | |gene_source=HGNC:9361 | ||
| + | |gene_symbol=SRGN | ||
| + | |gene_synonyms=PPG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9361 | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
|nearest_promoter_id=NM_001321054 | |nearest_promoter_id=NM_001321054 | ||
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=69088653 | ||
| + | |strand=+ | ||
| + | |transcript_name=AB528400 CU677333 KJ897372 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105303.1 | |tss_id=hg_105303.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB528400 CU677333 KJ897372 |
|---|---|
| Distance: | -497 |
| Num_trans: | 3 |
| All_trans: | AB528400:-497 CU677333:-497 KJ897372:-497 |
TATA-Box annotation
| Distance to TSS: | 644 |
|---|---|
| Nearest PromoterID: | NM_001321054 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
