Difference between revisions of "TSS:Hg 13296.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000615519.4:163 ENST00000616709.4:163 ENST00000613902.4:163 NM_001252273:163 NM_001006605:163 NM_001252270:163 NM_001252269:163 uc001dpc.4:163 uc0...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-187 | |distance_to_tss=-187 | ||
|end=92961733 | |end=92961733 | ||
| + | |end_of_center_position=92961709 | ||
|entrez_id=388650 | |entrez_id=388650 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
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|species=human | |species=human | ||
|start=92961684 | |start=92961684 | ||
| + | |start_of_center_position=92961708 | ||
|strand=- | |strand=- | ||
|tata_box="-36(CCCTTTAAGCTC,+,0.00),18(CCCTTTATGGCG,+,0.00)" | |tata_box="-36(CCCTTTAAGCTC,+,0.00),18(CCCTTTATGGCG,+,0.00)" | ||
Revision as of 04:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 92961708 |
|---|---|
| End of the center position in the TSS region: | 92961709 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000615519.4 ENST00000616709.4 ENST00000613902.4 NM_001252273 NM_001006605 NM_001252270 NM_001252269 uc001dpc.4 uc021opv.1 uc021opw.1 |
|---|---|
| Distance: | 163 |
| Num_trans: | 15 |
| All_trans: | ENST00000615519.4:163 ENST00000616709.4:163 ENST00000613902.4:163 NM_001252273:163 NM_001006605:163 NM_001252270:163 NM_001252269:163 uc001dpc.4:163 uc021opv.1:163 uc021opw.1:163 ENST00000370310.4:185 uc001dpg.4:185 BC070342:229 HQ447552:255 KJ904254:255 |
TATA-Box annotation
| Distance to TSS: | -187 |
|---|---|
| Nearest PromoterID: | NM_001252270 |
| Entrez ID: | 388650 |
| Nearest Unigene: | Hs.180946 |
| Nearest Refseq: | NM_001006605 |
| Nearest Ensembl: | ENSG00000154511 |
| Gene Name: | family with sequence similarity 69 member A |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 69 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-36(CCCTTTAAGCTC,+,0.00),18(CCCTTTATGGCG,+,0.00)" |
