Difference between revisions of "TSS:Hg 105331.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=108 |entrez_id=6832 |gc_percent=0.706468 |gene_alias=SUV3 |gene_description=Suv3 like RNA helicase |gene_name=SUPV3L1 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=CU690300:-15 DQ894183:-15 AF042169:-15 DQ891004:-15 KJ892230:-15 ENST00000422378.1:-19 uc057tsz.1:-19 ENST00000483572.5:-26 uc057tsy.1:-26 ENST00000471069.5:-57 uc057tsx.1:-57 AK299670:-57 AK290416:-57 BC036112:-70 ENST00000359655.8:-75 uc001jpe.2:-75 NM_001301683:-103 NM_003171:-103 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=-15 | ||
|distance_to_tss=108 | |distance_to_tss=108 | ||
| + | |end=69180317 | ||
|entrez_id=6832 | |entrez_id=6832 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=SUV3 | |gene_alias=SUV3 | ||
|gene_description=Suv3 like RNA helicase | |gene_description=Suv3 like RNA helicase | ||
| − | |gene_name=SUPV3L1 | + | |gene_id=6832 |
| + | |gene_name=Suv3 like RNA helicase | ||
| + | |gene_source=HGNC:11471 | ||
| + | |gene_symbol=SUPV3L1 | ||
| + | |gene_synonyms=SUV3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11471 | ||
|nearest_ensembl=ENSG00000156502 | |nearest_ensembl=ENSG00000156502 | ||
|nearest_promoter_id=NM_001323588 | |nearest_promoter_id=NM_001323588 | ||
|nearest_refseq=NM_003171 | |nearest_refseq=NM_003171 | ||
|nearest_unigene=Hs.106469 | |nearest_unigene=Hs.106469 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=69180306 | ||
| + | |strand=+ | ||
| + | |transcript_name=CU690300 DQ894183 AF042169 DQ891004 KJ892230 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105331.1 | |tss_id=hg_105331.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:31, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | CU690300 DQ894183 AF042169 DQ891004 KJ892230 |
|---|---|
| Distance: | -15 |
| Num_trans: | 18 |
| All_trans: | CU690300:-15 DQ894183:-15 AF042169:-15 DQ891004:-15 KJ892230:-15 ENST00000422378.1:-19 uc057tsz.1:-19 ENST00000483572.5:-26 uc057tsy.1:-26 ENST00000471069.5:-57 uc057tsx.1:-57 AK299670:-57 AK290416:-57 BC036112:-70 ENST00000359655.8:-75 uc001jpe.2:-75 NM_001301683:-103 NM_003171:-103 |
TATA-Box annotation
| Distance to TSS: | 108 |
|---|---|
| Nearest PromoterID: | NM_001323588 |
| Entrez ID: | 6832 |
| Nearest Unigene: | Hs.106469 |
| Nearest Refseq: | NM_003171 |
| Nearest Ensembl: | ENSG00000156502 |
| Gene Name: | Suv3 like RNA helicase |
| Gene Alias: | SUV3 |
| Gene Description: | Suv3 like RNA helicase |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
