Difference between revisions of "TSS:Hg 105359.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=9 |entrez_id=219738 |gc_percent=0.751244 |gene_alias=- |gene_description=chromosome 10 open reading frame 35 |gene_name=C10orf35...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000491890.1:0 ENST00000373279.5:0 NM_145306:0 uc057tuf.1:0 uc001jpq.5:0 BC013587:0 ENST00000421716.1:260 uc057tug.1:260 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=0 | ||
|distance_to_tss=9 | |distance_to_tss=9 | ||
| + | |end=69630284 | ||
|entrez_id=219738 | |entrez_id=219738 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 10 open reading frame 35 | |gene_description=chromosome 10 open reading frame 35 | ||
| − | |gene_name=C10orf35 | + | |gene_id=219738 |
| + | |gene_name=chromosome 10 open reading frame 35 | ||
| + | |gene_source=HGNC:23519 | ||
| + | |gene_symbol=C10orf35 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23519 | ||
|nearest_ensembl=ENSG00000171224 | |nearest_ensembl=ENSG00000171224 | ||
|nearest_promoter_id=NM_145306 | |nearest_promoter_id=NM_145306 | ||
|nearest_refseq=NM_145306 | |nearest_refseq=NM_145306 | ||
|nearest_unigene=Hs.522992 | |nearest_unigene=Hs.522992 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=69630227 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000491890.1 ENST00000373279.5 NM_145306 uc057tuf.1 uc001jpq.5 BC013587 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105359.1 | |tss_id=hg_105359.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZL0 Q96D05 | ||
}} | }} | ||
Revision as of 21:32, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000491890.1 ENST00000373279.5 NM_145306 uc057tuf.1 uc001jpq.5 BC013587 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000491890.1:0 ENST00000373279.5:0 NM_145306:0 uc057tuf.1:0 uc001jpq.5:0 BC013587:0 ENST00000421716.1:260 uc057tug.1:260 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_145306 |
| Entrez ID: | 219738 |
| Nearest Unigene: | Hs.522992 |
| Nearest Refseq: | NM_145306 |
| Nearest Ensembl: | ENSG00000171224 |
| Gene Name: | chromosome 10 open reading frame 35 |
| Gene Alias: | - |
| Gene Description: | chromosome 10 open reading frame 35 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
