Difference between revisions of "TSS:Hg 105393.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=168 |entrez_id=27143 |gc_percent=0.766169 |gene_alias=KIAA1274|PALD |gene_description="phosphatase domain containing, paladin 1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PALD= | ||
| + | |all_trans=BC136375:-36 BC136376:-36 ENST00000263563.6:-141 uc001jrd.5:-141 AB033100:-141 NM_014431:-154 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=-36 | ||
|distance_to_tss=168 | |distance_to_tss=168 | ||
| + | |end=70478990 | ||
|entrez_id=27143 | |entrez_id=27143 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=KIAA1274|PALD | |gene_alias=KIAA1274|PALD | ||
|gene_description="phosphatase domain containing, paladin 1" | |gene_description="phosphatase domain containing, paladin 1" | ||
| − | |gene_name=PALD1 | + | |gene_id=27143 |
| + | |gene_name="phosphatase domain containing, paladin 1" | ||
| + | |gene_source=HGNC:23530 | ||
| + | |gene_symbol=PALD1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23530 | ||
|nearest_ensembl=ENSG00000107719 | |nearest_ensembl=ENSG00000107719 | ||
|nearest_promoter_id=NM_014431 | |nearest_promoter_id=NM_014431 | ||
|nearest_refseq=NM_014431 | |nearest_refseq=NM_014431 | ||
|nearest_unigene=Hs.202351 | |nearest_unigene=Hs.202351 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=70478961 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC136375 BC136376 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105393.1 | |tss_id=hg_105393.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC136375 BC136376 |
|---|---|
| Distance: | -36 |
| Num_trans: | 6 |
| All_trans: | BC136375:-36 BC136376:-36 ENST00000263563.6:-141 uc001jrd.5:-141 AB033100:-141 NM_014431:-154 |
TATA-Box annotation
| Distance to TSS: | 168 |
|---|---|
| Nearest PromoterID: | NM_014431 |
| Entrez ID: | 27143 |
| Nearest Unigene: | Hs.202351 |
| Nearest Refseq: | NM_014431 |
| Nearest Ensembl: | ENSG00000107719 |
| Gene Name: | "phosphatase domain containing, paladin 1" |
| Gene Alias: | KIAA1274 |
| Gene Description: | "phosphatase domain containing, paladin 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
