Difference between revisions of "TSS:Hg 105417.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=199 |entrez_id=219699 |gc_percent=0.781095 |gene_alias=UNC5H2|p53RDL1 |gene_description=unc-5 netrin receptor B |gene_name=UNC5B...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AB096256:-139 AY358351:-142 ENST00000335350.10:-161 uc001jro.4:-161 ENST00000373192.4:190 uc001jrp.4:190 AY126437:190 NM_001244889:-196 NM_170744:-196 AK128132:-196 BC166694:248 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=-139 | ||
|distance_to_tss=199 | |distance_to_tss=199 | ||
| + | |end=71212737 | ||
|entrez_id=219699 | |entrez_id=219699 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=UNC5H2|p53RDL1 | |gene_alias=UNC5H2|p53RDL1 | ||
|gene_description=unc-5 netrin receptor B | |gene_description=unc-5 netrin receptor B | ||
| − | |gene_name=UNC5B | + | |gene_id=219699 |
| + | |gene_name=unc-5 netrin receptor B | ||
| + | |gene_source=HGNC:12568 | ||
| + | |gene_symbol=UNC5B | ||
| + | |gene_synonyms=UNC5H2 p53RDL1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12568 | ||
|nearest_ensembl=ENSG00000107731 | |nearest_ensembl=ENSG00000107731 | ||
|nearest_promoter_id=NM_170744 | |nearest_promoter_id=NM_170744 | ||
|nearest_refseq=NM_170744 | |nearest_refseq=NM_170744 | ||
|nearest_unigene=Hs.522997 | |nearest_unigene=Hs.522997 | ||
| + | |num_trans=11 | ||
| + | |p53RDL1= | ||
| + | |species=human | ||
| + | |start=71212730 | ||
| + | |strand=+ | ||
| + | |transcript_name=AB096256 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105417.1 | |tss_id=hg_105417.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:34, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB096256 |
|---|---|
| Distance: | -139 |
| Num_trans: | 11 |
| All_trans: | AB096256:-139 AY358351:-142 ENST00000335350.10:-161 uc001jro.4:-161 ENST00000373192.4:190 uc001jrp.4:190 AY126437:190 NM_001244889:-196 NM_170744:-196 AK128132:-196 BC166694:248 |
TATA-Box annotation
| Distance to TSS: | 199 |
|---|---|
| Nearest PromoterID: | NM_170744 |
| Entrez ID: | 219699 |
| Nearest Unigene: | Hs.522997 |
| Nearest Refseq: | NM_170744 |
| Nearest Ensembl: | ENSG00000107731 |
| Gene Name: | unc-5 netrin receptor B |
| Gene Alias: | UNC5H2 |
| Gene Description: | unc-5 netrin receptor B |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
