Difference between revisions of "TSS:Hg 105422.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=33 |entrez_id=55315 |gc_percent=0.79602 |gene_alias=ENT3|HCLAP|HJCD|PHID |gene_description=solute carrier family 29 member 3 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HCLAP= | ||
| + | |HJCD= | ||
| + | |PHID= | ||
| + | |all_trans=ENST00000479577.1:0 uc057twc.1:0 AK316152:0 BC120996:0 BC120997:0 AY358686:0 AK304503:0 BC050589:0 AK314497:0 BC063019:0 AY288928:0 ENST00000373189.5:-12 uc001jrr.5:-12 NM_001174098:-17 NM_018344:-17 NR_033414:-17 NR_033413:-17 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=0 | ||
|distance_to_tss=33 | |distance_to_tss=33 | ||
| + | |end=71319302 | ||
|entrez_id=55315 | |entrez_id=55315 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=ENT3|HCLAP|HJCD|PHID | |gene_alias=ENT3|HCLAP|HJCD|PHID | ||
|gene_description=solute carrier family 29 member 3 | |gene_description=solute carrier family 29 member 3 | ||
| − | |gene_name=SLC29A3 | + | |gene_id=55315 |
| + | |gene_name=solute carrier family 29 member 3 | ||
| + | |gene_source=HGNC:23096 | ||
| + | |gene_symbol=SLC29A3 | ||
| + | |gene_synonyms=ENT3 FLJ11160 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23096 | ||
|nearest_ensembl=ENSG00000198246 | |nearest_ensembl=ENSG00000198246 | ||
|nearest_promoter_id=NM_018344 | |nearest_promoter_id=NM_018344 | ||
|nearest_refseq=NM_018344 | |nearest_refseq=NM_018344 | ||
|nearest_unigene=Hs.438419 | |nearest_unigene=Hs.438419 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=71319269 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000479577.1 uc057twc.1 AK316152 BC120996 BC120997 AY358686 AK304503 BC050589 AK314497 BC063019 AY288928 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105422.1 | |tss_id=hg_105422.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:34, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000479577.1 uc057twc.1 AK316152 BC120996 BC120997 AY358686 AK304503 BC050589 AK314497 BC063019 AY288928 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000479577.1:0 uc057twc.1:0 AK316152:0 BC120996:0 BC120997:0 AY358686:0 AK304503:0 BC050589:0 AK314497:0 BC063019:0 AY288928:0 ENST00000373189.5:-12 uc001jrr.5:-12 NM_001174098:-17 NM_018344:-17 NR_033414:-17 NR_033413:-17 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_018344 |
| Entrez ID: | 55315 |
| Nearest Unigene: | Hs.438419 |
| Nearest Refseq: | NM_018344 |
| Nearest Ensembl: | ENSG00000198246 |
| Gene Name: | solute carrier family 29 member 3 |
| Gene Alias: | ENT3 |
| Gene Description: | solute carrier family 29 member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
