Difference between revisions of "TSS:Hg 10546.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=-887 |entrez_id=11209 |gc_percent=0.736318 |gene_alias=MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 |gene_descriptio...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MSPL-2= | ||
| + | |MSPL-3= | ||
| + | |MSPL1= | ||
| + | |MSPL2= | ||
| + | |MSPL3= | ||
| + | |MSTP1= | ||
| + | |MSTP2= | ||
| + | |MSTP3= | ||
| + | |all_trans=ENST00000635081.1:0 ENST00000362058.2:0 uc001azi.1:0 AK090414:0 AK123337:0 DQ587134:-32 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=0 | ||
|distance_to_tss=-887 | |distance_to_tss=-887 | ||
| + | |end=16644719 | ||
|entrez_id=11209 | |entrez_id=11209 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 | |gene_alias=MSPL-1|MSPL-2|MSPL-3|MSPL1|MSPL2|MSPL3|MSTP1|MSTP2|MSTP3 | ||
|gene_description=macrophage stimulating 1 pseudogene 2 | |gene_description=macrophage stimulating 1 pseudogene 2 | ||
| − | |gene_name= | + | |gene_id=84809 |
| + | |gene_name="ciliary rootlet coiled-coil, rootletin pseudogene 2" | ||
| + | |gene_source=HGNC:28170 | ||
| + | |gene_symbol=CROCCP2 | ||
| + | |gene_synonyms=MGC12760 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:28170 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_027504 | |nearest_promoter_id=NR_027504 | ||
|nearest_refseq=NR_027504 | |nearest_refseq=NR_027504 | ||
|nearest_unigene=Hs.349110 | |nearest_unigene=Hs.349110 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=16644654 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000635081.1 ENST00000362058.2 uc001azi.1 AK090414 AK123337 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10546.1 | |tss_id=hg_10546.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6ZWC0 | ||
}} | }} | ||
Revision as of 21:36, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000635081.1 ENST00000362058.2 uc001azi.1 AK090414 AK123337 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000635081.1:0 ENST00000362058.2:0 uc001azi.1:0 AK090414:0 AK123337:0 DQ587134:-32 |
TATA-Box annotation
| Distance to TSS: | -887 |
|---|---|
| Nearest PromoterID: | NR_027504 |
| Entrez ID: | 11209 |
| Nearest Unigene: | Hs.349110 |
| Nearest Refseq: | NR_027504 |
| Nearest Ensembl: | |
| Gene Name: | "ciliary rootlet coiled-coil, rootletin pseudogene 2" |
| Gene Alias: | MSPL-1 |
| Gene Description: | macrophage stimulating 1 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.15 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
