Difference between revisions of "TSS:Hg 105493.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=423 |entrez_id=54541 |gc_percent=0.711443 |gene_alias=Dig2|REDD-1|REDD1 |gene_description=DNA damage inducible transcript 4 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |REDD-1= | ||
| + | |REDD1= | ||
| + | |all_trans=KJ894039:-117 AB587474:-118 AM392607:-120 DQ890984:-120 DQ894159:-120 BC000708:-311 ENST00000471240.1:-314 uc057tyb.1:-314 AY090097:-331 BC015236:-388 AF335324:-397 BC007714:-402 ENST00000473155.1:-408 uc057tya.1:-408 AK000507:-409 ENST00000307365.3:-413 uc001jsx.2:-413 AL136668:-413 NM_019058:-414 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=-117 | ||
|distance_to_tss=423 | |distance_to_tss=423 | ||
| + | |end=72274352 | ||
|entrez_id=54541 | |entrez_id=54541 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_019058 | |nearest_refseq=NM_019058 | ||
|nearest_unigene=Hs.744875 | |nearest_unigene=Hs.744875 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=72274332 | ||
| + | |strand=+ | ||
| + | |transcript_name=KJ894039 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105493.1 | |tss_id=hg_105493.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ894039 |
|---|---|
| Distance: | -117 |
| Num_trans: | 19 |
| All_trans: | KJ894039:-117 AB587474:-118 AM392607:-120 DQ890984:-120 DQ894159:-120 BC000708:-311 ENST00000471240.1:-314 uc057tyb.1:-314 AY090097:-331 BC015236:-388 AF335324:-397 BC007714:-402 ENST00000473155.1:-408 uc057tya.1:-408 AK000507:-409 ENST00000307365.3:-413 uc001jsx.2:-413 AL136668:-413 NM_019058:-414 |
TATA-Box annotation
| Distance to TSS: | 423 |
|---|---|
| Nearest PromoterID: | NM_019058 |
| Entrez ID: | 54541 |
| Nearest Unigene: | Hs.744875 |
| Nearest Refseq: | NM_019058 |
| Nearest Ensembl: | ENSG00000168209 |
| Gene Name: | DDIT4 |
| Gene Alias: | Dig2 |
| Gene Description: | DNA damage inducible transcript 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
