Difference between revisions of "TSS:Hg 105523.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=80 |entrez_id=25961 |gc_percent=0.512438 |gene_alias=- |gene_description=nudix hydrolase 13 |gene_name=NUDT13 |gene_type=protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000357321.8:0 ENST00000349051.9:0 ENST00000488223.5:0 uc001jtl.5:0 uc001jtj.5:0 uc009xqw.5:0 BC031224:0 AK303235:38 ENST00000469925.1:59 uc057tzm.1:59 AK309755:61 AK316538:61 AK300980:61 ENST00000372997.3:69 uc001jtk.5:69 BC046173:69 ENST00000617744.4:-74 ENST00000537969.5:-74 ENST00000544879.5:-74 NM_015901:-74 NM_001283014:-74 NM_001283015:-74 NM_001283017:-74 NM_001283016:-74 NM_001283019:-74 NR_104264:-74 uc057tzl.1:-74 uc010qkd.3:-74 uc010qkc.3:-74 BC038833:75 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=80 | |distance_to_tss=80 | ||
| + | |end=73110461 | ||
|entrez_id=25961 | |entrez_id=25961 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=nudix hydrolase 13 | |gene_description=nudix hydrolase 13 | ||
| − | |gene_name=NUDT13 | + | |gene_id=25961 |
| + | |gene_name=nudix hydrolase 13 | ||
| + | |gene_source=HGNC:18827 | ||
| + | |gene_symbol=NUDT13 | ||
| + | |gene_synonyms=DKFZp586P2219 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18827 | ||
|nearest_ensembl=ENSG00000166321 | |nearest_ensembl=ENSG00000166321 | ||
|nearest_promoter_id=NR_104264 | |nearest_promoter_id=NR_104264 | ||
|nearest_refseq=NM_015901 | |nearest_refseq=NM_015901 | ||
|nearest_unigene=Hs.533657 | |nearest_unigene=Hs.533657 | ||
| + | |num_trans=30 | ||
| + | |species=human | ||
| + | |start=73110448 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000357321.8 ENST00000349051.9 ENST00000488223.5 uc001jtl.5 uc001jtj.5 uc009xqw.5 BC031224 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105523.1 | |tss_id=hg_105523.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q4G134 Q86X67 | ||
}} | }} | ||
Revision as of 21:39, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000357321.8 ENST00000349051.9 ENST00000488223.5 uc001jtl.5 uc001jtj.5 uc009xqw.5 BC031224 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | ENST00000357321.8:0 ENST00000349051.9:0 ENST00000488223.5:0 uc001jtl.5:0 uc001jtj.5:0 uc009xqw.5:0 BC031224:0 AK303235:38 ENST00000469925.1:59 uc057tzm.1:59 AK309755:61 AK316538:61 AK300980:61 ENST00000372997.3:69 uc001jtk.5:69 BC046173:69 ENST00000617744.4:-74 ENST00000537969.5:-74 ENST00000544879.5:-74 NM_015901:-74 NM_001283014:-74 NM_001283015:-74 NM_001283017:-74 NM_001283016:-74 NM_001283019:-74 NR_104264:-74 uc057tzl.1:-74 uc010qkd.3:-74 uc010qkc.3:-74 BC038833:75 |
TATA-Box annotation
| Distance to TSS: | 80 |
|---|---|
| Nearest PromoterID: | NR_104264 |
| Entrez ID: | 25961 |
| Nearest Unigene: | Hs.533657 |
| Nearest Refseq: | NM_015901 |
| Nearest Ensembl: | ENSG00000166321 |
| Gene Name: | nudix hydrolase 13 |
| Gene Alias: | - |
| Gene Description: | nudix hydrolase 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
