Difference between revisions of "TSS:Hg 10553.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-2 |entrez_id=105376805 |gc_percent=0.572139 |gene_alias=- |gene_description=uncharacterized LOC105376805 |gene_name=LOC1053768...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000457075.1:0 NR_135058:0 NR_135059:0 uc001azs.2:0 BC070363:0 ENST00000416869.1:7 uc057csm.1:7 NR_135056:171 NR_135057:171 ENST00000422124.1:276 uc057csl.1:276 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=0 | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
| + | |end=16889687 | ||
|entrez_id=105376805 | |entrez_id=105376805 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC105376805 | |gene_description=uncharacterized LOC105376805 | ||
| − | |gene_name=LOC105376805 | + | |gene_id=105376805 |
| + | |gene_name=uncharacterized LOC105376805 | ||
| + | |gene_source=EntrezGene:105376805 | ||
| + | |gene_symbol=LOC105376805 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000238142 | |nearest_ensembl=ENSG00000238142 | ||
|nearest_promoter_id=NR_135058 | |nearest_promoter_id=NR_135058 | ||
|nearest_refseq=NR_135056 | |nearest_refseq=NR_135056 | ||
|nearest_unigene=Hs.465405 | |nearest_unigene=Hs.465405 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=16889648 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000457075.1 NR_135058 NR_135059 uc001azs.2 BC070363 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10553.1 | |tss_id=hg_10553.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:39, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000457075.1 NR_135058 NR_135059 uc001azs.2 BC070363 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000457075.1:0 NR_135058:0 NR_135059:0 uc001azs.2:0 BC070363:0 ENST00000416869.1:7 uc057csm.1:7 NR_135056:171 NR_135057:171 ENST00000422124.1:276 uc057csl.1:276 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_135058 |
| Entrez ID: | 105376805 |
| Nearest Unigene: | Hs.465405 |
| Nearest Refseq: | NR_135056 |
| Nearest Ensembl: | ENSG00000238142 |
| Gene Name: | uncharacterized LOC105376805 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376805 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
