Difference between revisions of "TSS:Hg 105552.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=-71 |entrez_id=23053 |gc_percent=0.651741 |gene_alias=KIAA0913 |gene_description=zinc finger SWIM-type containing 8 |gene_name=Z...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK091621:20 ENST00000604729.5:25 uc057uda.1:25 ENST00000603114.5:67 ENST00000398706.6:67 NM_001242488:67 NM_001242487:67 NM_015037:67 uc057udb.1:67 uc001jve.4:67 AB020720:67 ENST00000446546.2:98 uc057udc.1:98 BC137249:98 BC137250:98 ENST00000604524.5:99 uc001jvf.4:99 ENST00000605216.5:105 uc009xrl.4:105 BC151206:105 ENST00000433366.6:126 uc057udd.1:126 AB384542:320 BC156550:320 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=20 | ||
|distance_to_tss=-71 | |distance_to_tss=-71 | ||
| + | |end=73785557 | ||
|entrez_id=23053 | |entrez_id=23053 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=KIAA0913 | |gene_alias=KIAA0913 | ||
|gene_description=zinc finger SWIM-type containing 8 | |gene_description=zinc finger SWIM-type containing 8 | ||
| − | |gene_name=ZSWIM8 | + | |gene_id=23053 |
| + | |gene_name=zinc finger SWIM-type containing 8 | ||
| + | |gene_source=HGNC:23528 | ||
| + | |gene_symbol=ZSWIM8 | ||
| + | |gene_synonyms=4832404P21Rik | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23528 | ||
|nearest_ensembl=ENSG00000214655 | |nearest_ensembl=ENSG00000214655 | ||
|nearest_promoter_id=NM_001242487 | |nearest_promoter_id=NM_001242487 | ||
|nearest_refseq=NM_015037 | |nearest_refseq=NM_015037 | ||
|nearest_unigene=Hs.65135 | |nearest_unigene=Hs.65135 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=73785548 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK091621 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105552.1 | |tss_id=hg_105552.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK091621 |
|---|---|
| Distance: | 20 |
| Num_trans: | 24 |
| All_trans: | AK091621:20 ENST00000604729.5:25 uc057uda.1:25 ENST00000603114.5:67 ENST00000398706.6:67 NM_001242488:67 NM_001242487:67 NM_015037:67 uc057udb.1:67 uc001jve.4:67 AB020720:67 ENST00000446546.2:98 uc057udc.1:98 BC137249:98 BC137250:98 ENST00000604524.5:99 uc001jvf.4:99 ENST00000605216.5:105 uc009xrl.4:105 BC151206:105 ENST00000433366.6:126 uc057udd.1:126 AB384542:320 BC156550:320 |
TATA-Box annotation
| Distance to TSS: | -71 |
|---|---|
| Nearest PromoterID: | NM_001242487 |
| Entrez ID: | 23053 |
| Nearest Unigene: | Hs.65135 |
| Nearest Refseq: | NM_015037 |
| Nearest Ensembl: | ENSG00000214655 |
| Gene Name: | zinc finger SWIM-type containing 8 |
| Gene Alias: | KIAA0913 |
| Gene Description: | zinc finger SWIM-type containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
