Difference between revisions of "TSS:Hg 105629.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-51 |entrez_id=100131213 |gc_percent=0.651741 |gene_alias=C10orf41|NCRNA00245 |gene_description=ZNF503 antisense RNA 2 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00245= | ||
| + | |all_trans=ENST00000484411.1:40 uc031wlh.2:40 NR_110300:41 BC029963:41 ENST00000491557.2:-61 NR_024422:-61 uc010qlg.3:-61 ENST00000527641.1:329 NR_110302:329 uc031wli.2:329 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=40 | ||
|distance_to_tss=-51 | |distance_to_tss=-51 | ||
| + | |end=75403836 | ||
|entrez_id=100131213 | |entrez_id=100131213 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=C10orf41|NCRNA00245 | |gene_alias=C10orf41|NCRNA00245 | ||
|gene_description=ZNF503 antisense RNA 2 | |gene_description=ZNF503 antisense RNA 2 | ||
| − | |gene_name=ZNF503-AS2 | + | |gene_id=100131213 |
| + | |gene_name=ZNF503 antisense RNA 2 | ||
| + | |gene_source=HGNC:23525 | ||
| + | |gene_symbol=ZNF503-AS2 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:23525 | ||
|nearest_ensembl=ENSG00000237149 | |nearest_ensembl=ENSG00000237149 | ||
|nearest_promoter_id=NR_110300 | |nearest_promoter_id=NR_110300 | ||
|nearest_refseq=NR_024421 | |nearest_refseq=NR_024421 | ||
|nearest_unigene=Hs.534598 | |nearest_unigene=Hs.534598 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=75403816 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000484411.1 uc031wlh.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105629.1 | |tss_id=hg_105629.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:43, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000484411.1 uc031wlh.2 |
|---|---|
| Distance: | 40 |
| Num_trans: | 10 |
| All_trans: | ENST00000484411.1:40 uc031wlh.2:40 NR_110300:41 BC029963:41 ENST00000491557.2:-61 NR_024422:-61 uc010qlg.3:-61 ENST00000527641.1:329 NR_110302:329 uc031wli.2:329 |
TATA-Box annotation
| Distance to TSS: | -51 |
|---|---|
| Nearest PromoterID: | NR_110300 |
| Entrez ID: | 100131213 |
| Nearest Unigene: | Hs.534598 |
| Nearest Refseq: | NR_024421 |
| Nearest Ensembl: | ENSG00000237149 |
| Gene Name: | ZNF503 antisense RNA 2 |
| Gene Alias: | C10orf41 |
| Gene Description: | ZNF503 antisense RNA 2 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
