Difference between revisions of "TSS:Hg 100375.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-166485 |entrez_id=401497 |gc_percent=0.661692 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 1242 |gene...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC022036:-67 ENST00000629369.1:-68 uc064smt.1:-68 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=-67 | ||
|distance_to_tss=-166485 | |distance_to_tss=-166485 | ||
| + | |end=30574944 | ||
|entrez_id=401497 | |entrez_id=401497 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1242 | |gene_description=long intergenic non-protein coding RNA 1242 | ||
| − | |gene_name=LINC01242 | + | |gene_id=401497 |
| + | |gene_name=long intergenic non-protein coding RNA 1242 | ||
| + | |gene_source=HGNC:49810 | ||
| + | |gene_symbol=LINC01242 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:49810 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_046204 | |nearest_promoter_id=NR_046204 | ||
|nearest_refseq=NR_046204 | |nearest_refseq=NR_046204 | ||
|nearest_unigene=Hs.680131 | |nearest_unigene=Hs.680131 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=30574933 | ||
| + | |strand=- | ||
| + | |transcript_name=BC022036 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100375.1 | |tss_id=hg_100375.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:07, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC022036 |
|---|---|
| Distance: | -67 |
| Num_trans: | 3 |
| All_trans: | BC022036:-67 ENST00000629369.1:-68 uc064smt.1:-68 |
TATA-Box annotation
| Distance to TSS: | -166485 |
|---|---|
| Nearest PromoterID: | NR_046204 |
| Entrez ID: | 401497 |
| Nearest Unigene: | Hs.680131 |
| Nearest Refseq: | NR_046204 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 1242 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1242 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
