Difference between revisions of "TSS:Hg 10588.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=84 |entrez_id=55920 |gc_percent=0.552239 |gene_alias=TD-60 |gene_description=regulator of chromosome condensation 2 |gene_name=R...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AB040903:-2 ENST00000375436.8:-41 uc001bam.4:-41 AJ421269:-41 NM_018715:-71 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=-2 | ||
|distance_to_tss=84 | |distance_to_tss=84 | ||
| + | |end=17439683 | ||
|entrez_id=55920 | |entrez_id=55920 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=TD-60 | |gene_alias=TD-60 | ||
|gene_description=regulator of chromosome condensation 2 | |gene_description=regulator of chromosome condensation 2 | ||
| − | |gene_name=RCC2 | + | |gene_id=55920 |
| + | |gene_name=regulator of chromosome condensation 2 | ||
| + | |gene_source=HGNC:30297 | ||
| + | |gene_symbol=RCC2 | ||
| + | |gene_synonyms=TD-60 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30297 | ||
|nearest_ensembl=ENSG00000179051 | |nearest_ensembl=ENSG00000179051 | ||
|nearest_promoter_id=NM_018715 | |nearest_promoter_id=NM_018715 | ||
|nearest_refseq=NM_018715 | |nearest_refseq=NM_018715 | ||
|nearest_unigene=Hs.380857 | |nearest_unigene=Hs.380857 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=17439657 | ||
| + | |strand=- | ||
| + | |transcript_name=AB040903 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10588.1 | |tss_id=hg_10588.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:54, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB040903 |
|---|---|
| Distance: | -2 |
| Num_trans: | 5 |
| All_trans: | AB040903:-2 ENST00000375436.8:-41 uc001bam.4:-41 AJ421269:-41 NM_018715:-71 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_018715 |
| Entrez ID: | 55920 |
| Nearest Unigene: | Hs.380857 |
| Nearest Refseq: | NM_018715 |
| Nearest Ensembl: | ENSG00000179051 |
| Gene Name: | regulator of chromosome condensation 2 |
| Gene Alias: | TD-60 |
| Gene Description: | regulator of chromosome condensation 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
