Difference between revisions of "TSS:Hg 242759.1"
From referenceTSS
| Line 3: | Line 3: | ||
|KOX3= | |KOX3= | ||
|ZNF325= | |ZNF325= | ||
| − | |all_trans= | + | |all_trans=AK291620:0 BC142953:-11 ENST00000518913.5:-35 BC002593:-35 BC009305:-35 BC032105:-35 BC044626:-35 ENST00000520982.5:37 ENST00000520626.6:37 BC136679:37 BC144365:37 BC144366:37 ENST00000518656.5:48 BC101763:48 BC101765:48 BC143338:48 ENST00000306349.13:85 ENST00000306385.10:85 NM_001199:85 NR_033403:85 NM_006129:85 NR_033404:85 M22488:90 ENST00000520970.5:-100 AB209590:-100 ENST00000471755.5:113 ENST00000483364.5:113 ENST00000521385.5:113 Y08723:113 Y08724:113 Y08725:113 AB527418:118 KJ896503:118 U50330:119 ENST00000397814.7:-147 ENST00000354870.5:-147 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=15298 |
|end=6691659 | |end=6691659 | ||
|end_of_center_position=22165287 | |end_of_center_position=22165287 | ||
|entrez_id=7559 | |entrez_id=7559 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=GIOT-3 | + | |gene_alias=GIOT-3{{!}}HZF11{{!}}KOX3{{!}}ZNF325 |
|gene_description=zinc finger protein 12 | |gene_description=zinc finger protein 12 | ||
| − | |gene_name= | + | |gene_id=649 |
| + | |gene_name=bone morphogenetic protein 1 | ||
| + | |gene_source=HGNC:1067 | ||
| + | |gene_symbol=BMP1 | ||
| + | |gene_synonyms=BMP-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1067 | ||
|nearest_ensembl=ENSG00000164631 | |nearest_ensembl=ENSG00000164631 | ||
|nearest_promoter_id=NM_006956 | |nearest_promoter_id=NM_006956 | ||
|nearest_refseq=NM_006956 | |nearest_refseq=NM_006956 | ||
|nearest_unigene=Hs.431471 | |nearest_unigene=Hs.431471 | ||
| − | |num_trans= | + | |num_trans=36 |
|species=human | |species=human | ||
|start=6691639 | |start=6691639 | ||
|start_of_center_position=22165286 | |start_of_center_position=22165286 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK291620 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242759.1 | |tss_id=hg_242759.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22165286 |
|---|---|
| End of the center position in the TSS region: | 22165287 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK291620 |
|---|---|
| Distance: | 0 |
| Num_trans: | 36 |
| All_trans: | AK291620:0 BC142953:-11 ENST00000518913.5:-35 BC002593:-35 BC009305:-35 BC032105:-35 BC044626:-35 ENST00000520982.5:37 ENST00000520626.6:37 BC136679:37 BC144365:37 BC144366:37 ENST00000518656.5:48 BC101763:48 BC101765:48 BC143338:48 ENST00000306349.13:85 ENST00000306385.10:85 NM_001199:85 NR_033403:85 NM_006129:85 NR_033404:85 M22488:90 ENST00000520970.5:-100 AB209590:-100 ENST00000471755.5:113 ENST00000483364.5:113 ENST00000521385.5:113 Y08723:113 Y08724:113 Y08725:113 AB527418:118 KJ896503:118 U50330:119 ENST00000397814.7:-147 ENST00000354870.5:-147 |
TATA-Box annotation
| Distance to TSS: | 15298 |
|---|---|
| Nearest PromoterID: | NM_006956 |
| Entrez ID: | 7559 |
| Nearest Unigene: | Hs.431471 |
| Nearest Refseq: | NM_006956 |
| Nearest Ensembl: | ENSG00000164631 |
| Gene Name: | bone morphogenetic protein 1 |
| Gene Alias: | GIOT-3|HZF11|KOX3|ZNF325 |
| Gene Description: | zinc finger protein 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
