Difference between revisions of "TSS:Hg 105945.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=64 |entrez_id=54462 |gc_percent=0.791045 |gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 |gene_description=coiled-coil serine ric...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gcap14= | ||
| + | |KIAA1128= | ||
| + | |all_trans=ENST00000224756.12:0 uc001kdh.3:0 AK298966:0 BC030528:11 ENST00000372088.6:-37 NM_018999:-37 NM_001284241:-37 NM_001284240:-37 uc010qmd.2:-37 ENST00000359979.8:-40 uc001kdg.3:-40 | ||
| + | |bA486O22.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=0 | ||
|distance_to_tss=64 | |distance_to_tss=64 | ||
| + | |end=84328680 | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 | |gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 | ||
|gene_description=coiled-coil serine rich protein 2 | |gene_description=coiled-coil serine rich protein 2 | ||
| − | |gene_name=CCSER2 | + | |gene_id=54462 |
| + | |gene_name=coiled-coil serine rich protein 2 | ||
| + | |gene_source=HGNC:29197 | ||
| + | |gene_symbol=CCSER2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29197 | ||
|nearest_ensembl=ENSG00000107771 | |nearest_ensembl=ENSG00000107771 | ||
|nearest_promoter_id=NM_001284241 | |nearest_promoter_id=NM_001284241 | ||
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=84328625 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000224756.12 uc001kdh.3 AK298966 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105945.1 | |tss_id=hg_105945.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9H7U1 | ||
}} | }} | ||
Revision as of 21:57, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000224756.12 uc001kdh.3 AK298966 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000224756.12:0 uc001kdh.3:0 AK298966:0 BC030528:11 ENST00000372088.6:-37 NM_018999:-37 NM_001284241:-37 NM_001284240:-37 uc010qmd.2:-37 ENST00000359979.8:-40 uc001kdg.3:-40 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_001284241 |
| Entrez ID: | 54462 |
| Nearest Unigene: | Hs.461988 |
| Nearest Refseq: | NM_018999 |
| Nearest Ensembl: | ENSG00000107771 |
| Gene Name: | coiled-coil serine rich protein 2 |
| Gene Alias: | FAM190B |
| Gene Description: | coiled-coil serine rich protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
