Difference between revisions of "TSS:Hg 9993.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HBP15/L22= | |HBP15/L22= | ||
|L22= | |L22= | ||
| − | |all_trans=ENST00000497965.5:-179 | + | |all_trans=ENST00000497965.5:-179 LF357510:-205 MA593087:-205 LF357511:494 MA593088:494 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-179 | |distance=-179 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-1061 |
|end=6200663 | |end=6200663 | ||
|end_of_center_position=6200657 | |end_of_center_position=6200657 | ||
|entrez_id=6146 | |entrez_id=6146 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=EAP | + | |gene_alias=EAP{{!}}HBP15{{!}}HBP15/L22{{!}}L22 |
|gene_description=ribosomal protein L22 | |gene_description=ribosomal protein L22 | ||
|gene_id=6146 | |gene_id=6146 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_000983 | |nearest_refseq=NM_000983 | ||
|nearest_unigene=Hs.515329 | |nearest_unigene=Hs.515329 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=6200649 | |start=6200649 | ||
|start_of_center_position=6200656 | |start_of_center_position=6200656 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000497965.5 | + | |transcript_name=ENST00000497965.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_9993.1 | |tss_id=hg_9993.1 | ||
Revision as of 22:15, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6200656 |
|---|---|
| End of the center position in the TSS region: | 6200657 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000497965.5 |
|---|---|
| Distance: | -179 |
| Num_trans: | 5 |
| All_trans: | ENST00000497965.5:-179 LF357510:-205 MA593087:-205 LF357511:494 MA593088:494 |
TATA-Box annotation
| Distance to TSS: | -1061 |
|---|---|
| Nearest PromoterID: | NM_000983 |
| Entrez ID: | 6146 |
| Nearest Unigene: | Hs.515329 |
| Nearest Refseq: | NM_000983 |
| Nearest Ensembl: | ENSG00000116251 |
| Gene Name: | ribosomal protein L22 |
| Gene Alias: | EAP|HBP15|HBP15/L22|L22 |
| Gene Description: | ribosomal protein L22 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
