Difference between revisions of "TSS:Hg 10061.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000377658.8:20 NM_001324309:20 NM_014851:20 AK075305:20 BC034039:20 BC064980:38 BC091648:38 ENST00000377663.3:-103 AB007938:-103 AK090472:222 DQ586011:337 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=20 |
| − | |distance_to_tss= | + | |distance_to_tss=-24 |
|end=6602898 | |end=6602898 | ||
|end_of_center_position=6602894 | |end_of_center_position=6602894 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:29041 | |hgnc_mgi_id=HGNC:29041 | ||
|nearest_ensembl=ENSG00000162413 | |nearest_ensembl=ENSG00000162413 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_014851 |
|nearest_refseq=NM_014851 | |nearest_refseq=NM_014851 | ||
|nearest_unigene=Hs.7764 | |nearest_unigene=Hs.7764 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=6602888 | |start=6602888 | ||
|start_of_center_position=6602893 | |start_of_center_position=6602893 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-7(CTATTTATAGCA,+,0.00) |
| − | |transcript_name=NM_014851 | + | |transcript_name=ENST00000377658.8 NM_001324309 NM_014851 AK075305 BC034039 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10061.1 | |tss_id=hg_10061.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6602893 |
|---|---|
| End of the center position in the TSS region: | 6602894 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377658.8 NM_001324309 NM_014851 AK075305 BC034039 |
|---|---|
| Distance: | 20 |
| Num_trans: | 11 |
| All_trans: | ENST00000377658.8:20 NM_001324309:20 NM_014851:20 AK075305:20 BC034039:20 BC064980:38 BC091648:38 ENST00000377663.3:-103 AB007938:-103 AK090472:222 DQ586011:337 |
TATA-Box annotation
| Distance to TSS: | -24 |
|---|---|
| Nearest PromoterID: | NM_014851 |
| Entrez ID: | 9903 |
| Nearest Unigene: | Hs.7764 |
| Nearest Refseq: | NM_014851 |
| Nearest Ensembl: | ENSG00000162413 |
| Gene Name: | kelch like family member 21 |
| Gene Alias: | - |
| Gene Description: | kelch like family member 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(CTATTTATAGCA,+,0.00) |
