Difference between revisions of "TSS:Hg 10082.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CDw137= | |CDw137= | ||
|ILA= | |ILA= | ||
| − | |all_trans=BC006196:0 U03397:0 L12964:0 | + | |all_trans=ENST00000377507.8:0 NM_001561:0 BC006196:0 U03397:0 L12964:0 LP895738:-73 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 12: | Line 12: | ||
|entrez_id=3604 | |entrez_id=3604 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=4-1BB | + | |gene_alias=4-1BB|CD137|CDw137|ILA |
|gene_description=TNF receptor superfamily member 9 | |gene_description=TNF receptor superfamily member 9 | ||
|gene_id=3604 | |gene_id=3604 | ||
| − | |gene_name= | + | |gene_name=TNF receptor superfamily member 9 |
|gene_source=HGNC:11924 | |gene_source=HGNC:11924 | ||
|gene_symbol=TNFRSF9 | |gene_symbol=TNFRSF9 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001561 | |nearest_refseq=NM_001561 | ||
|nearest_unigene=Hs.86447 | |nearest_unigene=Hs.86447 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=7940812 | |start=7940812 | ||
|start_of_center_position=7940837 | |start_of_center_position=7940837 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC006196 U03397 L12964 | + | |transcript_name=ENST00000377507.8 NM_001561 BC006196 U03397 L12964 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10082.1 | |tss_id=hg_10082.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q07011 |
}} | }} | ||
Revision as of 15:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7940837 |
|---|---|
| End of the center position in the TSS region: | 7940838 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377507.8 NM_001561 BC006196 U03397 L12964 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000377507.8:0 NM_001561:0 BC006196:0 U03397:0 L12964:0 LP895738:-73 |
TATA-Box annotation
| Distance to TSS: | 2328 |
|---|---|
| Nearest PromoterID: | NM_001561 |
| Entrez ID: | 3604 |
| Nearest Unigene: | Hs.86447 |
| Nearest Refseq: | NM_001561 |
| Nearest Ensembl: | ENSG00000049249 |
| Gene Name: | TNF receptor superfamily member 9 |
| Gene Alias: | 4-1BB |
| Gene Description: | TNF receptor superfamily member 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
