Difference between revisions of "TSS:Hg 92644.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000643185.2:-23 NM_001350162:-23 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=-23 |
| − | |distance_to_tss= | + | |distance_to_tss=31 |
|end=30912985 | |end=30912985 | ||
|end_of_center_position=30912977 | |end_of_center_position=30912977 | ||
|entrez_id=56154 | |entrez_id=56154 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=CT42 | + | |gene_alias=CT42{{!}}SPGF25 |
| − | |gene_description= | + | |gene_description=testis expressed 15, meiosis and synapsis associated |
| − | |gene_name=TEX15 | + | |gene_id=56154 |
| + | |gene_name=testis expressed 15, meiosis and synapsis associated | ||
| + | |gene_source=HGNC:11738 | ||
| + | |gene_symbol=TEX15 | ||
| + | |gene_synonyms=CT42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11738 | ||
|nearest_ensembl=ENSG00000133863 | |nearest_ensembl=ENSG00000133863 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350162 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001350162 |
|nearest_unigene=Hs.458316 | |nearest_unigene=Hs.458316 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=30912968 | |start=30912968 | ||
|start_of_center_position=30912976 | |start_of_center_position=30912976 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000643185.2 NM_001350162 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_92644.1 | |tss_id=hg_92644.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A2R8Y358 | ||
}} | }} | ||
Revision as of 19:25, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30912976 |
|---|---|
| End of the center position in the TSS region: | 30912977 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000643185.2 NM_001350162 |
|---|---|
| Distance: | -23 |
| Num_trans: | 2 |
| All_trans: | ENST00000643185.2:-23 NM_001350162:-23 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_001350162 |
| Entrez ID: | 56154 |
| Nearest Unigene: | Hs.458316 |
| Nearest Refseq: | NM_001350162 |
| Nearest Ensembl: | ENSG00000133863 |
| Gene Name: | testis expressed 15, meiosis and synapsis associated |
| Gene Alias: | CT42|SPGF25 |
| Gene Description: | testis expressed 15, meiosis and synapsis associated |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
